Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq358 125 6e-24 >seq358 Length=57982 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || || || || | || || || || ||| || | Sbjct 54968 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCT 54909 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || ||||| ||||||||||||||||| || ||||| Sbjct 54908 GATACGATCGATAATGTGAAGACGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAG 54849 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || ||||| || || | || ||| ||| ||| | || ||||||||| Sbjct 54848 CAACGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTACAAC 54789 Query 22399 ATTCAAAAAGAATCCAC 22415 || |||||||||||||| Sbjct 54788 ATCCAAAAAGAATCCAC 54772 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || ||| ||| ||| | ||| | |||| Sbjct 55472 ACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCATTGACAACGTCAAGACC 55413 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || |||||||||||||| ||||| ||||| || || || || || ||||| || || Sbjct 55412 AAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAGCGCCTGATTTTTGCGGGAAAG 55353 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || || ||||||| ||||||| ||||||||||| || || || ||| | || Sbjct 55352 CAGCTTGAAGACGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGTCGACCCTTCAC 55293 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 | ||| | || |||| || || Sbjct 55292 CTTGTTCTCCGTCTGCGTGGTGG 55270 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | || || || ||| |||| | ||||| || | | || Sbjct 54740 ATGCAGATCTTCGTTAAGACGCTCACTGGGAAGACGATCACATTGGAAGTTGAGAGCTCC 54681 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || |||||||||||||||||||| ||||| || || Sbjct 54680 GACACAATCGACAACGTCAAGACGAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 54621 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || |||||| | |||||| || || |||| || |||||| Sbjct 54620 CAGCGTCTCATCTTCGCTGGTAAACAGCTGGAGGATGGGCGTACGCTCTCTGACTACAAC 54561 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 54560 ATCCAGAAGGA 54550 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || || | || ||||| || |||| || || ||||| | | ||| || | | Sbjct 55186 TTGTGAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGACACTATCG 55127 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 || || | || || || || || |||||||| ||||| || || || || || | | Sbjct 55126 ACAATGTGAAGACCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGCTTGA 55067 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | || || || || ||| | |||||| |||||| | ||||| ||||||||||| || | Sbjct 55066 TCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAACATTCAGAAGG 55007 Query 22409 AATCCACCATACATTTAGT 22427 |||| ||| | || || || Sbjct 55006 AATCTACCCTTCACTTGGT 54988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723109644140