Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq832 123 5e-23 seq665 113 9e-20 >seq832 Length=429720 Score = 123 bits (136), Expect = 5e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| |||||| || || ||||||| |||||||| || ||| Sbjct 114803 GGTGAGGATCTTTGCAACTGCACTTTCTCTCTTGCCTATGGTGCCAAGATTCTCCTCAAC 114862 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| | | ||||||||| |||| || ||||| | || ||||| || | Sbjct 114863 CAGACTCACCTCCGCCTTAAGCGTGGCCACCGCTACGGTCTGCTTGGACCCAACGGTTCT 114922 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || |||| ||||| ||||| ||||| |||| ||||||||||| || || || Sbjct 114923 GGAAAGACTACTCTGATGCGTGCCATCAACAACGAGCAGCTGGAAGGTTTCCCCAAGAAG 114982 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | ||||| Sbjct 114983 GATGAGGTTAAGACCGTCTACGTTGAGCACGACTTGGACTC 115023 Score = 109 bits (120), Expect = 1e-18 Identities = 108/137 (79%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| |||||||||||||| || ||| ||||| | ||| ||| || Sbjct 116205 CTCACTCCCGCATGCGCGGTCTTTCTGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCTT 116264 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 ||||| ||||||| |||||||||||||| |||||||| || |||||||| || ||||| Sbjct 116265 GCTCT-TGGCAACGACCTCACGTGATCGTCCTCGACGAACCCACCAACTACCTTGACCGT 116323 Query 280821 GAGAGCCTGGGCGCTCT 280837 || ||| || ||||| Sbjct 116324 GACTCCCTTGGTGCTCT 116340 >seq665 Length=165048 Score = 113 bits (124), Expect = 9e-20 Identities = 271/405 (67%), Gaps = 14/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||||||||| ||||||||||||||||||||| ||| Sbjct 63209 TCGAAGAAGTTGGTCTTACCAGCCAGAGAGATGGTCTCCATGAAGTCGAAGGGGTTAGTG 63268 Query 251623 GCATT---GTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 || || ||||| |||| | ||||| || || | | |||||| || |||||||| Sbjct 63269 GCGTTGAAGTACTTCTTG---TTACCAAGAGCGACAAGAAGGCGGTCAGCAACAAACTCA 63325 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | ||||| | ||| || | | |||||| || | | || |||| || || | Sbjct 63326 ATGTACTGACACATGAGGTTGGCGTTCATTCCCAGGAGCGCGCAGGGAAGAGCATCCGTG 63385 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT-GTGCCAG 251795 | ||| ||||| ||| | | ||| ||||| | | || ||| |||| || | Sbjct 63386 AGGAACTCCTTCTCGATAGAAACCGCCTCAACGATGATGTCCTCGACGACCTGGTTGGAT 63445 Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855 ||| || ||| ||| | ||| | || | | |||| | ||| |||||||| Sbjct 63446 GGAC-GCCAGTT---CAGGTGAGAGAAGAGCAAGCAGGCAAAGTCGGTGTGGAGACCCTC 63501 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| || ||||| |||||| || | || || ||||||| ||||| ||| | || Sbjct 63502 GTCACGCGAGATGAGCTCGTTAGAGAACGTGAGACCGGGCATCAAGCCACGCTTCTTCAG 63561 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 ||| ||||| | | ||| || || ||||| | | |||||| || Sbjct 63562 CCAAAAGATAGAGGCAAACGAGCCGGAGAAGAAGATACCCTCAAC 63606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027824210283996