Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq358 140 8e-28 seq225 107 5e-18 >seq358 Length=57982 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| |||||||||||| || || || | Sbjct 54742 CCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAC 54801 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||| ||||| ||||| || ||||| || ||| || Sbjct 54802 AGGGTACGGCCATCTTCGAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCCGGAGGA 54861 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| ||||| || || || | ||| |||||||| Sbjct 54862 ATACCCTCCTTGTCCTGAATCTTCGTCTTCACATTATCGATCGTATCAGAGGATTCTACC 54921 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| || || |||||||||||||| |||||||| Sbjct 54922 TCCAGCGTAATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 54968 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | |||||| || || ||||| || ||||| | | Sbjct 54514 CCACCGCGGAGACGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAG 54573 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | ||||| || |||||||| |||||||| || | |||| Sbjct 54574 AGCGTACGCCCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGG 54633 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || || || |||| || ||||| || || | || |||| || Sbjct 54634 ATACCCTCCTTGTCTTGAATCTTCGTCTTGACGTTGTCGATTGTGTCGGAGCTC---TCA 54690 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||||||||||| || || ||||| ||||| |||||||| Sbjct 54691 ACTTCCAATGTGATCGTCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||||| | ||||| || || || | || || || ||||| Sbjct 55005 TTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 55064 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| ||||| || | || || || || ||||||||||| || | ||||| || Sbjct 55065 GATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGGTCTTCACATT 55124 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||||| || || || ||||| ||||| ||||| || || || ||||| || Sbjct 55125 GTCGATAGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTCAC 55184 >seq225 Length=456365 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || || || || || || | || || || ||||||||| Sbjct 291656 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 291597 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | ||||| || || || |||||||| || | || ||||| || Sbjct 291596 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 291537 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 291536 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 291478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639950708168