Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq225 132 5e-26 seq358 127 2e-24 seq803 105 8e-18 >seq225 Length=456365 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| ||||| || | || |||||||||||||||||||| | Sbjct 291658 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 291599 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | |||||||||| |||||| |||||| ||| | Sbjct 291598 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 291540 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 291539 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 291480 Query 46583 AA 46584 || Sbjct 291479 AA 291478 >seq358 Length=57982 Score = 127 bits (140), Expect = 2e-24 Identities = 131/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || ||||| |||| || |||||||| || || || Sbjct 55305 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGCTGCTTTCCCGCAAA 55364 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| || | || ||||||||| |||||| |||||| ||| Sbjct 55365 AATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGT 55423 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | |||||||| || || || || | |||||||| |||||||| Sbjct 55424 TGTCAATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 55472 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || ||||||||||| | |||||| | || ||||||||||| || ||||| Sbjct 55006 TCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAG 55065 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | || |||||| ||| |||||| |||| | | Sbjct 55066 ATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGGTCTTCACATTG 55125 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||||| || ||||| || | ||||| || || || || || || || ||| Sbjct 55126 TCGATAGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTCACA 55185 Query 46583 A 46583 | Sbjct 55186 A 55186 Score = 114 bits (126), Expect = 1e-20 Identities = 171/239 (72%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| ||||| || | | ||| | |||| || | || |||||||| ||||| |||| Sbjct 54506 ATTAATTGCCACCGCGGAGACGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGT 54565 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || || || ||| | || || ||||| || || ||||| || | |||||||||| Sbjct 54566 AGTCAGAGAGCGTACGCCCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGT 54625 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | ||||||||| |||||| |||||| ||| | | | ||||| | Sbjct 54626 CAGGTGGGATACCCTCCTTGTCTTGAATCTTCGTCTTGA-CGTTGTCGATTGTGTCGGAG 54684 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || |||| ||||| || || || || ||||| ||||| ||||| ||||| Sbjct 54685 CTC---TCAACTTCCAATGTGATCGTCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 >seq803 Length=243990 Score = 105 bits (116), Expect = 8e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || || || | || |||||||| ||||| |||||||| || |||||||| | Sbjct 207360 ACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCC 207301 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || ||||| |||| ||||||||||||| || | | |||||| Sbjct 207300 GTCCTCGAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTT 207241 Query 46498 GTC 46500 ||| Sbjct 207240 GTC 207238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231645401120