Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq163 98.7 8e-15 seq220 87.8 1e-11 >seq163 Length=163164 Score = 98.7 bits (108), Expect = 8e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||||||||| || || || ||| || ||||| ||||| ||||||||||| || Sbjct 147624 ACTGTACCAGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAAGATGCTGGTGCCATC 147565 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||| ||||||||||| || || ||||| |||||||| || ||||| |||| ||||| Sbjct 147564 TCTGGTCTTAATGTTCTCCGCATCATCAACGAACCTACCGCCGCTGCTATTGCTTATGGT 147505 Query 550529 CT 550530 || Sbjct 147504 CT 147503 >seq220 Length=139599 Score = 87.8 bits (96), Expect = 1e-11 Identities = 176/261 (67%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||||| |||||||| || ||||| ||||| | | ||| Sbjct 101573 GCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACCGC 101514 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 | || || |||||||| || || |||||| | ||||| || |||| || ||||||| Sbjct 101513 ATCGACATCATTGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCACC 101454 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | | |||||||| ||||| | || | | | || ||| ||| Sbjct 101453 GACACCGAGCGTCTCATCGGTGATGCCGCAAAGAACCAGGTCGCCATGAACCCTCACAAC 101394 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | || ||||| || ||| | || || | ||||| || | || ||||| Sbjct 101393 ACTGTCTTCGATGCCAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAAGTCCAGGCT 101334 Query 550232 GATATGAAGCATTGGCCTTTC 550252 ||||||||||| ||||| ||| Sbjct 101333 GATATGAAGCACTGGCCCTTC 101313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029245442408440