Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq196 123 3e-22 seq665 114 2e-19 seq92 109 7e-18 >seq196 Length=229298 Score = 123 bits (136), Expect = 3e-22 Identities = 92/108 (85%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||||| |||||||| ||||| || | |||||||| | || ||||| Sbjct 183838 GCTGCTAACTACCTCGATATCAAGCCGCTGCTTGACATCGGGTGCAAAACCGTCGCCAAT 183897 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 183898 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACATTTAACATC 183945 >seq665 Length=165048 Score = 114 bits (126), Expect = 2e-19 Identities = 173/244 (71%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || | || ||||| Sbjct 63182 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGAGAGATG 63241 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||| | | ||| ||| ||| | | || |||||| Sbjct 63242 GTCTCCATGAAGTCGAAGGGGTTAGTGGCGTTGAAGTACTTCTTGTTACCAAGAGCGA-- 63299 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || |||||||| || |||||||| |||||||| ||||||||| ||||||||| || | Sbjct 63300 CAAGAAGGCGGTCAGCAACAAACTCAATGTACTGACACATGAGGTTGGCGTTCATTCCCA 63359 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || | || | | ||||| |||||||| || ||||| |||| Sbjct 63360 GGAGCGCGCAGGGAAGAGCATCCGTGAGGAACTCCTTCTCGATAGAAACCGCCTCAACGA 63419 Query 868929 TGAT 868932 |||| Sbjct 63420 TGAT 63423 Score = 93.3 bits (102), Expect = 5e-13 Identities = 137/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | ||||| || | ||| |||||||| | ||| ||||| Sbjct 63496 ACCCTCGTCACGCGAGATGAGCTCGTTAGAGAACGTGAGACCGGGCATCAAGCCACGCTT 63555 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||||||||| | | || ||| ||||| ||||| ||||| ||||| ||||| Sbjct 63556 CTTCAGCCAAAAGATAGAGGCAAACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCAAA 63615 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | || || | ||| || ||| || ||| | | ||||||||| || ||||| Sbjct 63616 TGCAACCAGACGTTGGGCGAA--TGTAGA-TTCCTGATCCTGGATCCACTTAATAGCCCA 63672 Query 869359 GTCGGCCTTTTT 869370 ||||||||| || Sbjct 63673 GTCGGCCTTCTT 63684 >seq92 Length=59634 Score = 109 bits (120), Expect = 7e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 || |||||||| || || || || |||||| |||||||| || | |||||||||||| Sbjct 49941 GATAGCATCGGTGGAACAGTAACCTGCGTGATCCGCAACGTCCCCGTCGGCCTCGGCGAG 49882 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| ||||| | |||||| ||| ||||| |||||||| ||||| ||||| Sbjct 49881 CCCTGCTTCGACAAACTTGAGGCCCAGCTTGCCCATGCCATGCTCAGCATCCCCGCCACA 49822 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| ||||| || ||| Sbjct 49821 AAGGGTTTCGAAATCGGC 49804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107060746163052