Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq665 111 2e-18 seq616 87.8 3e-11 >seq665 Length=165048 Score = 111 bits (122), Expect = 2e-18 Identities = 363/561 (65%), Gaps = 71/561 (13%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| |||||||| |||||||| ||||| |||| | Sbjct 64082 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCCTTCTGGACCGCTGAGGAAATCGATC 64024 Query 1455835 TCG----GCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| || ||||||||| ||| Sbjct 64023 TCTCGAAGGACCTCCACG----ACTGGAACAACCGCCTGACTGATGACGAGCGCTTCTTC 63968 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| || || || || || ||| ||||| ||||||||| || |||||||||| Sbjct 63967 ATCTCGCGTGTTCTGGCTTTCTTT-GCCGCTTCCGATGGCATTGTCAACGAGAACCTGCT 63909 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||| || || | || ||||| || | || ||||| |||||||| Sbjct 63908 GGAACGATTCAGTGGAGAAGTGCAGATTCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 63849 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | ||||| ||||| || | || || ||||| ||| |||| ||||| || ||||||| Sbjct 63848 CATGATCGAGAACATTCATGCCGAGACGTACTCTCTCTTGATTGACACTTATATCAAGGA 63789 Query 1456068 CCCGGTCGAGAAGG--ACC-ACCTCTTTCGCGCCATCGACACG-----GTGCC------- 1456112 || | || || ||| |||||||| ||||| || || || || Sbjct 63788 GCC---CAAGCAGCGCACCTACCTCTTTGATGCCATTGATACTAGTGTGTTCCCAAATAC 63732 Query 1456113 ---------GT------CGGTGA----------------------GGAAAAAGGCCGACT 1456135 || || ||| | || |||||||||| Sbjct 63731 GCCCTTGATGTTGACTGCGCTGACATGTAAAAGTTCCTTGCATTCGCAAGAAGGCCGACT 63672 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTT 1456195 |||| || ||||||||| | | ||| || ||| || ||| | || || || | || Sbjct 63671 GGGCTATTAAGTGGATCCAGGATCAGGAA-TCTACA-TTCGCCCAACGTCTGGTTGCATT 63614 Query 1456196 TGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAA 1456254 ||| || || ||||| ||||| ||||| ||| || | | ||||||||||| ||||| Sbjct 63613 TGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTTGCCTCTATCTTTTGGCTGAAGAA 63554 Query 1456255 GCGCGGCCTCATGCCCGGTCT 1456275 ||| ||| | ||||||||||| Sbjct 63553 GCGTGGCTTGATGCCCGGTCT 63533 Score = 100 bits (110), Expect = 4e-15 Identities = 177/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| ||||| || |||||||| ||||| ||| || | || || ||| Sbjct 63423 ATCATCGTTGAGGCGGTTTCTATCGAGAAGGAGTTCCTCACGGATGCTCTTCCCTGCGCG 63364 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| | || |||||||||| | |||||||| ||||||||||| ||| || || ||||||| Sbjct 63363 CTCCTGGGAATGAACGCCAAC-CTCATGTGTCAGTACATTGAGTTT-GTTGCTGACCGCC 63306 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || || || | ||||| ||| | | | ||||| ||| | ||| Sbjct 63305 TTCTTGTCGCTCTTGGTAACA-AGAAGTACTTCAACGCCACTAACCCCTTCGACTTCATG 63247 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| ||||| || | || ||||||||||| |||||| || || || || ||| Sbjct 63246 GAGACCATCTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 63187 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 63186 AAGGCAGGTGTCA 63174 >seq616 Length=132684 Score = 87.8 bits (96), Expect = 3e-11 Identities = 192/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| ||| ||||| || | || || || ||||| || || || || | Sbjct 62796 ATGTCCCAGAAGTACTTCACACATGCTTCTCCGACTCTGTTTAACGCTGGTACTCCTCAG 62855 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || ||| | || ||||| || | |||||||||| || || || || || || Sbjct 62856 CCTCAGCTGGCTTCCTGCTTCTTGGTTGACATGAAGGAGGACAGCATTGACGGTATTTAC 62915 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 ||||| || ||| || ||| | ||||| ||| | || || || |||||| | || Sbjct 62916 GACACACTGAAGACATGTGCGATGATCTCTAAGACTGCTGGTGGTATCGGTCTGAACGTT 62975 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | || ||| | ||| | ||| | | || || || || ||| |||||| | Sbjct 62976 CACCGCATTCGGGCCACAGGCTCATACATCGGTGGTACGAATGGATCGTCTAACGGCATC 63035 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || ||||||||||| || || ||| |||| || | ||||| |||||| Sbjct 63036 GTTCCCATGCTTCGTGTGTTCAACAACACAGCTAGATACGTTGACCAG 63083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177718992042872