Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq358 192 2e-43 seq163 152 2e-31 seq311 98.7 3e-15 >seq358 Length=57982 Score = 192 bits (212), Expect = 2e-43 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || |||||||| || |||||||| || || ||||| Sbjct 54738 CATACCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCTTTTTGGATGTTGTAATC 54797 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| ||||| || || || |||||||||||||| || Sbjct 54798 AGACAGGGTACGGCCATCTTCGAGTTGCTTTCCGGCGAAAATGAGACGTTGCTGATCCGG 54857 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || | || |||||||| |||| |||||| | ||| Sbjct 54858 AGGAATACCCTCCTTGTCCTGAATCTTCGTCTTCACATTATCGATCGTATCAGAGGATTC 54917 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| |||||||| || || || || || ||||||||||| Sbjct 54918 TACCTCCAGCGTAATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 54968 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| ||||| || || ||||| || || || Sbjct 54966 CATACCACCACGAAGGCGGAGCACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTC 55025 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || || || || ||||| ||||| | || ||||| ||||| Sbjct 55026 GGACAAAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGG 55085 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || |||||||| || || | || ||||| || || | || | || Sbjct 55086 AGGAATGCCCTCCTTATCCTGGATCTTGGTCTTCACATTGTCGATAGTGTCGCTAGACTC 55145 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 || || || || | ||||| || || || || || |||| Sbjct 55146 CACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTCACAA 55186 >seq163 Length=163164 Score = 152 bits (168), Expect = 2e-31 Identities = 333/493 (68%), Gaps = 7/493 (1%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||| |||||||||||||||| || || || ||||||| || || ||||||||| Sbjct 147633 GCTGTTGTTACTGTACCAGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAAGATGCT 147574 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || ||| | || | |||||||| | || || || ||||| || || || || ||| Sbjct 147573 GGTGCCATCTCTGGTCTTAATGTTCTCCGCATCATCAACGAACCTACCGCCGCTGCTATT 147514 Query 349730 GCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| || | | || | ||| | || ||| |||| || | ||| | Sbjct 147513 GCTTATGGTCTAGGCTCTGGAAAGTCTGAGAAGGAGCGTAATGTTCTGATCTACGATCTT 147454 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 || |||||||| || ||||| | || |||| | ||| ||| |||| ||| || Sbjct 147453 GGCGGTGGTACCTTCGATGTCAGCTTGCTGAACA-TCCAAGGTGGAGTTTTCACAGTCAA 147395 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 ||||||||||||||||| || |||||||| | || ||||| | ||| || ||| Sbjct 147394 GGCAACTGCTGGTGATACTCACCTTGGTGGTCAGGACTTTGACACGAACCTCCTTGAGCA 147335 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 || || ||||| || | || | || || | | || | || || | Sbjct 147334 CTTCAAGAAGGAATTCCAGAAGAAGACTGGCAAGGACCTTTCTGGTGATGCAAGGGCTTT 147275 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAA 350024 |||||| |||||||| || ||||| ||||| ||||| | ||| || | | || || | Sbjct 147274 GCGTCGTCTAAGAACCGCCTGTGAGCGTGCGAAGCGCACACTTTCCAAC-GCAACTCAGA 147216 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 ||||| | |||||||| || | |||||| | |||||| | |||||||| |||| Sbjct 147215 CCTCTGTCGAAATTGACTCATTATTCGATGGCGAGGATTTCAACACCTCTATTACTCGTG 147156 Query 350085 CTCGGTTTGAAGA 350097 |||| ||||| || Sbjct 147155 CTCGCTTTGAGGA 147143 >seq311 Length=176938 Score = 98.7 bits (108), Expect = 3e-15 Identities = 97/125 (78%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || ||||||||| | ||||| ||| ||||||| |||||||||||||||||| || || Sbjct 84610 CGAGGCACACCAAGGGTAACGTTC---TTAGATGAAACACCAGCAAAGTGGAAGGTGTTC 84554 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | || | ||| |||| ||||||||||| ||||| || || | ||| || ||||| || Sbjct 84553 AATGTCATTTGGGTAGCCGGCTCACCAATGGACTGAGCGGCCAGAACACCGACCATCTCA 84494 Query 377578 CCAGG 377582 || || Sbjct 84493 CCTGG 84489 Score = 95.1 bits (104), Expect = 4e-14 Identities = 213/320 (67%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186 ||||| ||||| || ||| |||||||| | | | ||| | ||||| ||| Sbjct 83926 CCATCCTCTCCGTAAATGAACTGAACAATATCACCCAGCGAGTTACGGACAGTGCCGTCA 83867 Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246 ||| | ||||| | || || | || |||| || || |||||||||||||| Sbjct 83866 TATTTGACCATGACCTCCTCAAGCGCCTTAACCAGCTTACGCTGAATATAACCAGTTTCG 83807 Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306 || || || |||||||| || ||||| | | |||| |||| || |||||||| || Sbjct 83806 GCGGTCTTGACAGCAGTATCGATCAAACCTTCTCTACCAGCCATAGCGTGGAAGAAGAAC 83747 Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366 || || || || | |||| || | | ||| |||||| || ||||| | | || || Sbjct 83746 TCTGTGGGGGTTAAGCCACGAAGATACGAATTCTCAACGAACCCTCTGGATTCCGGAGAG 83687 Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426 | || | ||| ||| | || || || || || | | || ||| | ||||| ||||| Sbjct 83686 TAGTCGTCTTTCGTAAAGTGCGGCAAAGTGCGGTATTTGAAACCAAACGGAATACGTTTA 83627 Query 378427 CCATCAACATTCTGTTGACC 378446 || ||||| |||||||| Sbjct 83626 CCCTCAACGGATTGTTGACC 83607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515235840027668