Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq616 192 6e-44 seq665 86.0 7e-12 >seq616 Length=132684 Score = 192 bits (212), Expect = 6e-44 Identities = 378/547 (69%), Gaps = 14/547 (3%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| || | ||| ||| |||||||| || || || | || || ||||| ||| Sbjct 62781 GAGACCTACAACCTGATGTCCCAGAAGTACTTCACACATGCTTCTCCGACTCTGTTTAAC 62840 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||| |||||| || | ||||||| |||| | |||||||| ||| Sbjct 62841 GCTGGTACTCCTCAGCCTCAGCTGGCTTCCTGCTTCTTGGTTGACATGAAGGAGGACAGC 62900 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || ||||| || ||||| || || ||| ||||| ||||| ||| | |||||| Sbjct 62901 ATTGACGGTATTTACGACACACTGAAGACATGTGCGATGATCTCTAAGACTGCTGGTGGT 62960 Query 53423 ATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 |||||| | || | || | || | || || | ||| || ||| || ||||| | Sbjct 62961 ATCGGTCTGAAC-GTTC-ACCGCATTCGGGCCACAGGCTCATACATCGGTGGTACGAATG 63018 Query 53481 GCGTCG-CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 | ||| | | || ||||| || ||||| || || ||||||||||| || | ||||| Sbjct 63019 G-ATCGTCTAACGGCATCGTTCCCATGCTTCGTGTGTTCAACAACACAGCTAGATACGTT 63077 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 |||||||||| |||||| || | ||||| |||||||| |||||||||||||| Sbjct 63078 GACCAGGGTGGAAACAAGCGCCCTGGTGCCTTCGCTATCTACCTGGAGCCGTGGCACGCT 63137 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGG---TGACGAAGAGATGCGCTGC 53656 || | | || || | || || || ||| || || || |||| || | ||| Sbjct 63138 GATGTCTTTGAATTCTTGGACCTCCGCAAGAACCACGGAAAGGAGGAAGTGA-GAGCT-- 63194 Query 53657 CGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGA 53715 ||||| ||||| ||| ||||| |||| || || || |||||| | || ||| | Sbjct 63195 CGTGATCTGTTCTAC-GCTCTCTGGACCCCCGATCTGTTCATGAAGCGTGTTGAGGCAAA 63253 Query 53716 CGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGA 53775 || || ||| ||| | ||||| |||||| ||| ||||| | ||||||||| || Sbjct 63254 CGGTGACTGGACCCTTTTCTGCCCCAACGAGGCCCCTGGCCTTGCAGATGTCTACGGAGA 63313 Query 53776 GGAGTTT 53782 ||||||| Sbjct 63314 GGAGTTT 63320 Score = 105 bits (116), Expect = 7e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| | ||| |||||||||||||||| | ||| | | | || ||| || Sbjct 64249 TCAAGGCCCTCTACAAGACGGTGTGGGAGATTTCCCAGCGCCGAATTCTGGAGATGGCTG 64308 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 |||| |||||||| ||||| || |||||||||||||| |||||| || || | || Sbjct 64309 CTGACCGTGGTGCATACATTGATCAGTCCCAGTCTCTCAACATCCATTTGAAGGAGCCCA 64368 Query 55848 CACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| |||| | | || | ||||||||| || ||||||| ||| || ||||| || Sbjct 64369 CCATGGGCAAGATCA-CTAGCATGCACTTTGCTGGCTGGAAGATGGGTCTGAAGACTGGC 64427 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| || || || Sbjct 64428 ATGTACTACCTCCGTAC 64444 >seq665 Length=165048 Score = 86.0 bits (94), Expect = 7e-12 Identities = 170/249 (68%), Gaps = 7/249 (3%) Strand=Plus/Plus Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 ||||||||| || ||||||||||| | |||||| |||| | | |||| | ||| Sbjct 63802 TGTCAATCAAGAGAGAGTACGTCTCGGCATGAATGTTCTCGATCATGATCTGGAAACCGT 63861 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTAC--ATCCTTTGAAAAATTCATGTCGATATTCTC 75139 |||| | || ||||| | |||||| || ||| |||| ||| | | ||||| Sbjct 63862 AGAAGCAGCGGGCCTCGGGAATCTGCACTTCTCCACTGAATCGTTCCAG--CAGGTTCTC 63919 Query 75140 CATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC 75199 |||| ||||| || || ||||| || |||||||| || ||| ||| |||||| Sbjct 63920 GTTGACAATGCCATCGGAAGCGGCAAAGAAAGCCAGAACACGCGAGATGAAGAAGCGCTC 63979 Query 75200 ATCGTCAGT---GAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256 || ||||| | | |||| ||| || | |||||| || | ||| || ||||| | Sbjct 63980 GTCATCAGTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTCGAGAGATCGATTTCCTCAGC 64039 Query 75257 CGTCCAGAA 75265 |||||||| Sbjct 64040 GGTCCAGAA 64048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209460768800