Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq358 131 1e-25 seq803 98.7 6e-16 >seq358 Length=57982 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| ||||||||||| || ||||| || || || || || ||| Sbjct 54523 AGACGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGC 54582 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || |||||||| || || || | |||||| ||||| || || | |||||| Sbjct 54583 CCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATACCCTCC 54642 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| || || || ||| | |||||||| |||||| ||||||| || Sbjct 54643 TTGTCT-TGAATCTTCGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCAACTTCCAATGT 54701 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || | ||| || || || |||||||| Sbjct 54702 GATCGTCTTCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| |||||||| || || || || || || |||||||||| || || || ||||| Sbjct 55305 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGCTGCTTTCCCGCAAA 55364 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || | ||||| ||||| || || | |||||||||||| |||||| Sbjct 55365 AATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTT 55412 >seq803 Length=243990 Score = 98.7 bits (108), Expect = 6e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||||| || | ||||| ||||||||||| || ||||| || || ||| Sbjct 207371 CCGCCACGCAGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 207312 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || ||||| || || || | |||||| ||||| || || Sbjct 207311 AGAGTGCGGCCGTCCTCGAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCGGGGGGG 207252 Query 34600 ACTCCCTCCTTGTCTGT 34616 | |||||||||||||| Sbjct 207251 ATACCCTCCTTGTCTGT 207235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725933006748