Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq358 86.0 4e-12 >seq358 Length=57982 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || ||||| ||||| || ||||| | || || ||| | | Sbjct 54968 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCT 54909 Query 27850 GA--CGATGTACAATCGGTCAA-ACAAAAAAT-AGCCGACAAAGAAGGTGTTCCGATGGA 27905 || |||| | ||| || || || || | | || ||||| || ||| |||| ||| Sbjct 54908 GATACGATCGATAAT--GTGAAGACGAAGATTCAG--GACAAGGAGGGTATTCCTCCGGA 54853 Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965 |||||||| | ||||| |||||||| ||| | || || | || | | |||| ||||| Sbjct 54852 TCAGCAACGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTA 54793 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||||||| |||| | || | || | ||| | ||||| || Sbjct 54792 CAACATCCAAAAAGAATCCACTCTTCACCTCGTCCTCCGTCTCCGTGGTGG 54742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858253758212