Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq358 87.8 2e-12 >seq358 Length=57982 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || ||||||||||| || || || || || || | || || || | || || Sbjct 54532 ACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGCCCATCCTCC 54591 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 |||||||| || || || || |||||||||||||| |||||| | | ||| ||||| Sbjct 54592 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGG-ATACCCTCCTTGTCTTG 54650 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || ||| |||| ||| | | | || ||| ||| || |||| ||||| | | Sbjct 54651 AATCTTCGTCTTGA-CGTTGTCGATTGTGTCGGAGCTCTCAACTTCCAATGTGATCGTCT 54709 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| ||||| ||||| ||||| Sbjct 54710 TCCCAGTGAGCGTCTTAACGAAGATCTGCAT 54740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540595256828