Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq358 102 6e-17 >seq358 Length=57982 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| ||||| || || || || || || || ||| | Sbjct 54968 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCT 54909 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || || || | || ||||| || ||| | || || ||||| Sbjct 54908 GATACGATCGATAATGTGAAGACGAAGA-TTCAGGACAAGGAGGGTATTCCTCCGGATCA 54850 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || ||||| || ||||| ||||| | || || | |||||||| Sbjct 54849 GCAACGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTACAA 54790 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||| ||||| Sbjct 54789 CATCCAAAAAGAATCCAC 54772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005661765648