Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20sp._20Z5_20[genbank_20GCA_5F001044295.1_202015-07-01] 956 sequences; 33,810,366 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq358 165 2e-35 seq225 123 6e-23 seq616 95.1 3e-14 >seq358 Length=57982 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || || || || ||||| ||| ||| || Sbjct 54965 CAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACGCTGGAGGTAGAATCCTCTGAT 54906 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| || || || |||||||| |||||| Sbjct 54905 ACGATCGATAATGTGAAGACGAAGATTCAGGACAAGGAGGGTATTCCTCCGGATCAGCAA 54846 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| || ||||||||||| | || || | ||||| ||| || Sbjct 54845 CGTCTCATTTTCGCCGGAAAGCAACTCGAAGATGGCCGTACCCTGTCTGATTACAACATC 54786 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 54785 CAAAAAGAATCCACTCTTCACCTCGT 54760 Score = 118 bits (130), Expect = 3e-21 Identities = 147/199 (74%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATC 177989 ||||| || ||||| || || || ||||||||||||||||| ||| ||||| ||| Sbjct 55184 GTGAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC---GACACTATC 55128 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||| ||||| || || || || ||||| |||||||| || | Sbjct 55127 GACAATGTGAAGACCAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGCTTG 55068 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| || || |||||||| ||||| | ||| | |||| || ||| | || || Sbjct 55067 ATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTTTGTCCGACTACAACATTCAGAAG 55008 Query 178110 GAATCAACACTGCATCTTG 178128 ||||| || || || |||| Sbjct 55007 GAATCTACCCTTCA-CTTG 54990 >seq225 Length=456365 Score = 123 bits (136), Expect = 6e-23 Identities = 138/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 291477 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 291533 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 291534 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 291593 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 291594 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTGAGCGACTACAACATCCA 291653 Query 178106 AAA 178108 || Sbjct 291654 GAA 291656 >seq616 Length=132684 Score = 95.1 bits (104), Expect = 3e-14 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 214252 CCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGA 214311 || || ||||| ||| || ||||||| ||||| ||| ||||||||||| |||| Sbjct 63352 CCTTCCTTTTCATACCGCTCGTAAAGAGCTTCAAACTCCTCTCCGTAGACATCTGCAAGG 63293 Query 214312 CCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATG 214371 || || |||||||||||||||||||| |||| | || || || || | |||||| Sbjct 63292 CCAGGGGCCTCGTTGGGGCAGAAAAGGGTCCAGTCACCGTTTGCCTCAACACGCTTCATG 63233 Query 214372 AAAAGGTCGGAAGTCCAGATTGCATAAAAAATCTCTCTGGCTCTCATAAGGTCATCACCT 214431 || || |||| ||||||| || || || | || | |||||| | || || | Sbjct 63232 AACAGATCGGGGGTCCAGAGAGCGTAGAACAGATCACGAGCTCTC---ACTTCCTCCTTT 63176 Query 214432 CC-CGGTTTTTTCG--CGTCGACAAAGTCAAAGATATCAACGTGCCA 214475 || |||| || || ||| | || ||||||| |||| ||||||| Sbjct 63175 CCGTGGTTCTTGCGGAGGTCCAAGAATTCAAAGACATCAGCGTGCCA 63129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203716455797464