Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001630395.1_202016-04-25] 26 sequences; 29,325,441 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 114 3e-20 seq17 113 1e-19 seq16 86.0 1e-11 >seq9 Length=1587660 Score = 114 bits (126), Expect = 3e-20 Identities = 186/267 (70%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 ||| ||||| |||| ||| || |||||||| | |||||| || ||||||| || Sbjct 771935 CTTGACGAAGTCGGCCAGGTTACCCTTGTAGCACACCAGCTTC---TTCTGTTCGTAGTG 771879 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 | ||| ||||| || |||||||||| ||||||||||| || |||| || | Sbjct 771878 GTAGATATCCGTGCAGACCTCGTCGAGGAAGCCGGAGTCGTGACTGACGATCAAGCTGGT 771819 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 | ||| | || | | ||||| || || |||| ||||||| | || |||||| Sbjct 771818 GATGTCGGTGTGGCTCTTGAGGTACTCCTGCAGCCACTTCACGTTGGCGACGTCAAGATG 771759 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| ||||| ||||| || || || | | || |||| |||||| ||||| || | || Sbjct 771758 GTTAGTCGGTTCGTCCAGCAGAAGGACGTCGGCCTTCATGAGCATGGCACGGGCCAAGGC 771699 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAG 319667 || ||||| ||||| || || ||||| Sbjct 771698 CAGCTTCATCTTCCAACCACCCGAAAG 771672 >seq17 Length=2485870 Score = 113 bits (124), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | || ||| | || ||||| || | ||||||||| | | || Sbjct 427938 GAGAAGGAGTTCCTCACGGATGCTCTGCCC-GTCGCTCTGCTGGGCATGAACTCCAAGCT 427996 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | ||||||||||| ||||| || ||||| | | ||||| |||||| || | || Sbjct 427997 GATGTGCCAGTACATCGAGTTCGTTGCGGACCGTCTCCTGGTTGCTCTTGGTAACAACAA 428056 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 | | |||| | ||||| || | || |||||| || || || || ||||| Sbjct 428057 GTACTTCCACTCCACCAACCCGTTCGACTTCATGGAGTCGATCTCCCTGGCTGGCAAGAC 428116 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||||| ||||| || ||||||| |||| | ||||||||||| Sbjct 428117 CAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCTGGTGTGATG 428165 >seq16 Length=2214688 Score = 86.0 bits (94), Expect = 1e-11 Identities = 252/373 (68%), Gaps = 14/373 (4%) Strand=Plus/Plus Query 282392 CACGATAGGTGTGATGAACTTCTTCAAGAAAC-CTGGAATTTCTAGGAGACTGGGAAAAC 282450 |||||| || |||||||||| ||| ||||| | ||||||| || | |||||||| Sbjct 1773890 CACGATTGGAGTGATGAACTCAATCA-GAAACTCGGGAATTTTGAGCAAGCTGGGAAATT 1773948 Query 282451 -AGCTATGGAAAAAGTTCATGA-CAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTC 282508 ||| || | ||||| || | |||| || || ||||| | || ||| ||| || Sbjct 1773949 GAGCC-TGAAGGAAGTTGATAAGCAAGCCCTTAA-TGTGACTCCCATCATGATCTTGATC 1774006 Query 282509 GGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGT 282568 ||||||||||||| ||||||||| | ||| | ||||| ||||| | || | Sbjct 1774007 AGTCATGATCATCAAATGACCGTAACGAAGACCACGGGTGTCGGTGTACTCCTTCTTGTG 1774066 Query 282569 TTGAAGGCCCA--AAATTTGTTTGA-GCGCGGTGATTTCTTCGTTCTTTGTGATACTTGC 282625 || ||||| | ||||| |||| | | | |||||||| |||||| | ||| | Sbjct 1774067 CTGCAGGCCAATGAAATT--CTTGATGTTCTG-GATTTCTTGGTTCTTCGCGATCTGATC 1774123 Query 282626 CACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTC 282685 | |||||||| |||||||| || | ||||| || | ||| || ||||| | || Sbjct 1774124 GAAGGATGCATCACGAACGTTGAGGAGTTTACCACGCAAAGGGAAGACACCGAAAAGATC 1774183 Query 282686 GCGACCGACCACGGACAGTCCTGCAATTGC-AAGTGTTGCTGCGGAATCTCCCTCCGTCA 282744 | ||||| |||| | || || || || ||| || ||||| || || || || | Sbjct 1774184 AGGGCCGACAACGGCACGCCCCGCCATGGCTAAGCCTT-TAGCGGAGTCACCTTCTGTAA 1774242 Query 282745 AGATGAGAGTACA 282757 ||||| ||||| Sbjct 1774243 GAATGAGTGTACA 1774255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823647612380