Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001630395.1_202016-04-25] 26 sequences; 29,325,441 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 seq17 86.0 6e-12 >seq19 Length=2751756 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| ||||||| || || || || || ||||| || ||| | Sbjct 1951798 CCACCACGCAGACGCAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 1951857 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| || ||||| |||||||| ||||||| || |||||||||||||| Sbjct 1951858 AGGGTCCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1951917 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| || || | | || | |||||| ||| ||| ||| Sbjct 1951918 ATACCTTCCTTATCCTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTGGACTCGACC 1951977 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754 || | ||| | |||||||| |||| || || |||| Sbjct 1951978 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGA 1952014 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||||||||| || ||||| |||||| | |||| ||||| ||||| || || Sbjct 1951600 GTAGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 1951659 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 || |||||||||| ||||| ||||| || ||||| || ||||| ||| | || | || Sbjct 1951660 GCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC-TTGAATCTTAGACTT 1951718 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||||| || |||||||| | ||| | ||||| ||||||| || Sbjct 1951719 GACGTTGTCGATCGTGTCGGAGGATTCCACCTCCAGGGTAATGGTCTTTCCGGTCAGGGT 1951778 Query 139747 TTTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 1951779 CTTGACAAAGATCTGCATA 1951797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || |||||||| || ||| || |||| || |||||||||||||| Sbjct 1952124 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGTTTACCC 1952183 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 || | ||||| || ||||| || ||||| || || || ||||| ||| | || | || Sbjct 1952184 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC-CTGAATCTTGGACTT 1952242 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | |||||| ||| ||| ||||| | || | ||||||||||| | || Sbjct 1952243 GACATTGTCGATGGTGTCGCTGGACTCGACCTCTAGAGTGATGGTCTTGCCGGTGAGAGT 1952302 Query 139747 TTTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 1952303 CTTGACGAAGATCTGCAT 1952320 >seq17 Length=2485870 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| |||| ||||| || ||||| | ||||| ||| | ||||| | || ||||| Sbjct 427923 GAGGCTGTCGCGATTGAGAAGGAGTTCCTCACGGATGCTCTGCCCGTCGCTCTGCTGGGC 427982 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGAC 52941 |||||| | | |||||||| ||||||||||||| ||||||||| Sbjct 427983 ATGAACTCCAAGCTGATGTGCCAGTACATCGAGTTCGTTGCGGAC 428027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063838779200