Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001630395.1_202016-04-25] 26 sequences; 29,325,441 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13 176 6e-39 seq17 125 1e-23 >seq13 Length=1912382 Score = 176 bits (194), Expect = 6e-39 Identities = 476/719 (66%), Gaps = 12/719 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | || |||||| |||| || || | || | | Sbjct 1715496 TCGAACTCGTCACCGTAGACATCTGCCAAGCCAGGAGCCTCGTTCGGGCAAAACAGAGTC 1715437 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || || |||| ||| || || ||||| ||||| || ||| |||| || || ||| || Sbjct 1715436 CAGTCGCCATTGGCCTCGACCCGCTTCATGAAGAGGTCGGGAGTCCACAGGGC-ATAGAA 1715378 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || || | | ||| |||||| || || ||||| ||||| | |||| | | Sbjct 1715377 AAGGTCACGTGCTCTGACCTCCTCTTTGCCGTGGTTCTTGCGCAGATCCAAGAACTCGAA 1715318 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| || ||||| || |||| ||| ||||| | | ||||| || ||||| || || Sbjct 1715317 CACATCCGAGTGCCAGGGCTCCAGGTAGATGGCAAAGGCACCCGGACGCTTGTTGCCGCC 1715258 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | ||| ||||| || | || | | ||| |||| || ||| ||||| Sbjct 1715257 CTGGTCAACATAGCGAGCAGTGTTGTTGAATACCCGGAGCATGGGAACAAGACCGTTGGA 1715198 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGATAGA 80217 ||||| ||||| || || || ||| | | || ||| | | || || Sbjct 1715197 GGTACCGTTGGTACCACCAATGTAAGAGCCAGTCGAGCGGATACGGTGCACGTT--AAGG 1715140 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || | || || || | || || || | || |||||||| ||| Sbjct 1715139 CCAATGCCACCAGCGTTCTTCGAAATCATGGCACAGGTCTTCAGGGTGTCATAGATACCC 1715080 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC-ATTTGGTGACGACTAGT 80336 || ||||| || || |||||| | || || || | || | | ||| | | ||| Sbjct 1715079 TCAATGCTGTCCTCCTTCATGTCCACCAGGAAGCA-CGAGGCAAGCTGGGGCTGGGGAGT 1715021 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || ||| |||| | ||||||||| ||||| || || |||| | ||||| | | || Sbjct 1715020 GCCGGCACTAAACAGGGTAGGAGAGGCGTGGGTGAAGTATTTCTGAGACATCAAGTGATA 1714961 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAAC 80454 |||||||| || |||| || ||||| || || || || || |||||||| | | Sbjct 1714960 GGTCTCAATGGC--CTTCTCAATGTCATTGCCGTGGATACCCACGGCAACACGCATGAGC 1714903 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514 | ||||| || | || | | |||| ||| || || || ||| || |||| | Sbjct 1714902 AGATGCTGGGGACGCTCTGCAACCTTGCCATTGATACGCAGCAGGTACGACCGCTCCAGA 1714843 Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || |||||||| |||| || |||||| || ||||| | |||| |||||||||| Sbjct 1714842 GTCTTGAAACCAAAGAAGTTATAGTTAAAGTCCCGGTCGTAGACAATAGCCGAGTTGAG 1714784 >seq17 Length=2485870 Score = 125 bits (138), Expect = 1e-23 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || || ||| || |||||||| | | || || |||||||| Sbjct 427870 AACAGCAGGCAAGCAAAGTCAGTGTGAAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 427811 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| |||||||| || |||||||| || ||||| || ||||| || || || ||| Sbjct 427810 AAAGTGAGACCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAAGAGCCA 427751 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG-CGCT 50129 || |||||||| || || || ||||| ||||| ||||| | || || | | | | || Sbjct 427750 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCCACAAGACGCTGGCCGAAGGTCGACTCT 427691 Query 50130 G--TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 || || |||||||| ||||||||||||||||| Sbjct 427690 TGATCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 427653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268566562640