Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001931935.1_202017-01-04] 331 sequences; 31,588,614 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 120 6e-22 seq318 118 2e-21 seq250 86.0 1e-11 >seq9 Length=157999 Score = 120 bits (132), Expect = 6e-22 Identities = 146/198 (74%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 230441 GTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 ||||| ||| | ||||||||| | | || ||| | ||||||||||| ||||| || ||| Sbjct 15650 GTCGCTCTTCTGGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTTGCGGAC 15591 Query 230500 CGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTT 230559 ||| | | ||||| |||||| || | || | |||||| | ||||| || | || Sbjct 15590 CGCCTCCTAGTTGCTCTTGGTAACAACAAGTACTTCAACTCCACCAACCCGTTCGACTTC 15531 Query 230560 ATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 |||||| || || | || ||||||||||||||||| ||||| || ||||||| Sbjct 15530 ATGGAGTCGATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAC 15471 Query 230620 CAGAGGCCTGGTGTGATG 230637 |||| | ||||||||||| Sbjct 15470 CAGAAGGCTGGTGTGATG 15453 >seq318 Length=1050389 Score = 118 bits (130), Expect = 2e-21 Identities = 244/357 (68%), Gaps = 7/357 (2%) Strand=Plus/Plus Query 319313 TGATACCCTCGAGGA-ACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAG 319370 ||||||| |||||| ||||||| ||| ||||| || || | || | | ||| || Sbjct 289556 TGATACCGGCGAGGATACCCGGGGGAGGG-AACTTGAAC-TGCACGTTGGACGCGGACAG 289613 Query 319371 GGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTA 319430 || |||||| ||| | || || | ||| ||||| |||| ||||| |||||||| Sbjct 289614 GGTGTAGTAGCTCTTCGCCTCAGGCTTCACCTTGACGAAGTCGGCGAGATTACCCTTGTA 289673 Query 319431 CTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAA 319490 | |||||| || ||||||| ||| ||| ||||| || |||||||||| Sbjct 289674 GCACACCAGCTTC---TTCTGTTCGTAGTGGTAGATATCCGTGCAGACCTCGTCGAGGAA 289730 Query 319491 CCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAAT 319550 ||||||||||| || |||| || | | ||| | || | | ||||| || Sbjct 289731 GCCGGAGTCGTGACTGACGATCAAGCTGGTGATGTCAGTGTGGCTCTTGAGGTACTCTTG 289790 Query 319551 CAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTT 319610 || |||| ||||||| | || |||||||| ||||| ||||| || || || | | Sbjct 289791 CAGCCACTTCACGTTGGCGACGTCGAGATGGTTAGTCGGTTCGTCCAGCAGAAGGACGTC 289850 Query 319611 TGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 || ||||| ||||| ||||| || | ||| || ||||| ||||| || || || || Sbjct 289851 GGCCTTCAGAAGCATGGCACGGGCCAAAGCCAGCTTCATCTTCCAACCACCCGAGAG 289907 >seq250 Length=893193 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 319811 CGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAA 319870 |||| || || || || ||||| | || || | ||||| |||||| || |||| Sbjct 385964 CGTCAAGGTCATGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAA 386023 Query 319871 GCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACA 319930 |||| |||| || || ||||| ||||| | ||||| | ||||| || ||| | Sbjct 386024 GCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTACCGGTACCGTTGGGACCAAGGA 386083 Query 319931 GACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCAC 319990 |||||||||| | || || ||||| || | || | ||| |||||||| || ||| Sbjct 386084 GACCGTAGCGCTGCCCACGCTTCAGACGGAGGTGAGTCTGGTTAAGAAGAATCTTGGCAC 386143 Query 319991 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 |||| || || || || || | |||||||||||||| Sbjct 386144 CATAAGCAAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 386183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819513834530