Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001931935.1_202017-01-04] 331 sequences; 31,588,614 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq318 123 5e-23 seq250 95.1 3e-14 seq9 89.7 1e-12 >seq318 Length=1050389 Score = 123 bits (136), Expect = 5e-23 Identities = 245/357 (69%), Gaps = 7/357 (2%) Strand=Plus/Plus Query 333637 TGATACCCTCGAGGA-ACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAG 333694 ||||||| |||||| ||||||| ||| ||||| || || | || | | ||| || Sbjct 289556 TGATACCGGCGAGGATACCCGGGGGAGGG-AACTTGAAC-TGCACGTTGGACGCGGACAG 289613 Query 333695 GGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTA 333754 || |||||| ||| | || || | ||| ||||| |||| ||||| |||||||| Sbjct 289614 GGTGTAGTAGCTCTTCGCCTCAGGCTTCACCTTGACGAAGTCGGCGAGATTACCCTTGTA 289673 Query 333755 CTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAA 333814 | |||||| || ||||||| ||| ||| ||||| || |||||||||| Sbjct 289674 GCACACCAGCTTC---TTCTGTTCGTAGTGGTAGATATCCGTGCAGACCTCGTCGAGGAA 289730 Query 333815 CCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAAT 333874 ||||||||||| || |||| || | | ||| | || | | ||||| || Sbjct 289731 GCCGGAGTCGTGACTGACGATCAAGCTGGTGATGTCAGTGTGGCTCTTGAGGTACTCTTG 289790 Query 333875 CAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTT 333934 ||||||| ||||||| | || |||||||| ||||| ||||| || || || | | Sbjct 289791 CAGCCACTTCACGTTGGCGACGTCGAGATGGTTAGTCGGTTCGTCCAGCAGAAGGACGTC 289850 Query 333935 TGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 || ||||| ||||| ||||| || | ||| || ||||| ||||| || || || || Sbjct 289851 GGCCTTCAGAAGCATGGCACGGGCCAAAGCCAGCTTCATCTTCCAACCACCCGAGAG 289907 >seq250 Length=893193 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 334135 CGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAA 334194 |||| || || || || ||||| | || || | ||||| |||||| || |||| Sbjct 385964 CGTCAAGGTCATGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAA 386023 Query 334195 GCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACA 334254 |||| |||| || || ||||| || || | ||||| | ||||| || ||| | Sbjct 386024 GCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTACCGGTACCGTTGGGACCAAGGA 386083 Query 334255 GACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCAC 334314 |||||||||| | |||||||||||| || | || | ||| |||||||| || ||| Sbjct 386084 GACCGTAGCGCTGCCCACGCTTCAGACGGAGGTGAGTCTGGTTAAGAAGAATCTTGGCAC 386143 Query 334315 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||| || || || || || | |||||||||||||| Sbjct 386144 CATAAGCAAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 386183 >seq9 Length=157999 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | ||||||||||| | || ||| | ||||||||||| ||||| || |||||| | Sbjct 15644 CTTCTGGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTTGCGGACCGCCTC 15585 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || |||||| | | || | |||||||| ||||| || | ||| |||||| Sbjct 15584 CTAGTTGCTCTTGGTAACAACAAGTACTTCAACTCCACCAACCCGTTCGACTTCATGGAG 15525 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 || || | || || || ||||||||||| ||||| || |||| || || Sbjct 15524 TCGATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAAG 15465 Query 243742 CCTGGTGTGATG 243753 ||||||||||| Sbjct 15464 GCTGGTGTGATG 15453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875322754850