Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001931935.1_202017-01-04] 331 sequences; 31,588,614 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq281 104 1e-17 seq229 86.0 4e-12 >seq281 Length=267225 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||||||||||| || ||||| || || || || || || | ||||| || || Sbjct 259379 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCTTCCAGCTGC 259320 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | |||||| |||||||| || | ||||||||||| |||| || Sbjct 259319 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC-TT 259261 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| || |||||||||| || || || || ||||| Sbjct 259260 GGACTTGACGTTGTCGATCGTGTCGGAACTTTCCACTTCCAATGTGATGGTCTTTCCGGT 259201 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || || |||||||| Sbjct 259200 GAGGGTTTTGACGAAGATCTGCAT 259177 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/227 (70%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | |||||||||| |||||| |||||||| || || || || || || Sbjct 258644 AGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTCCGG 258585 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || ||||| || || || | ||||| ||||| || || | |||||| Sbjct 258584 CCGTCCTCAAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGAATACCCTCC 258525 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCT---CTCCACTTCCAC 34664 ||||| ||| || | || || || || ||| ||||| ||| || || | Sbjct 258524 TTGTC-CTGAATCTTGGACTTGACATTATCGATGGTG---TCGCTAGACTCGACCTCGAG 258469 Query 34665 GGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || || || || ||||| | || || || || ||||||||| ||| Sbjct 258468 AGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATGGTGA 258422 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || || ||||| ||||| || || || || | ||||| || || || ||||| || Sbjct 259140 CTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 259081 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | |||||| ||||| ||||| | |||||||||||| ||| || | || ||| Sbjct 259080 GATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCT-TGAATCTTGGACTTGACGT 259022 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||||| |||| ||| || || || ||||| | || || | Sbjct 259021 TGTCGATCGTGTCGGAGGATTCCACCTCCAGGGTAATGGTCTTTCCGGTCAGAGTCTTAA 258962 Query 34694 CAAAAATCTGCAT 34706 | || |||||||| Sbjct 258961 CGAAGATCTGCAT 258949 >seq229 Length=586210 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| || ||||| || || ||||| || || |||| || || || Sbjct 482202 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGC 482261 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 || ||||| || || | |||||| |||||||| || | |||||||||||||| Sbjct 482262 TTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTG 482313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728330361123