Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001931935.1_202017-01-04] 331 sequences; 31,588,614 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq281 104 2e-17 >seq281 Length=267225 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || || || ||||| || || || || || || || ||| | Sbjct 258949 ATGCAGATCTTCGTTAAGACTCTGACCGGAAAGACCATTACCCTGGAGGTGGAATCCTCC 259008 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | ||||| || || Sbjct 259009 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGCATCCCGCCCGACCAG 259068 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || |||||||| || |||||||| | ||||| | |||||||||| Sbjct 259069 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAAC 259128 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 259129 ATCCAGAAAGAGTCTAC 259145 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || ||||||||||| || || || | Sbjct 258427 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCTAGC 258486 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || ||| | || || || || Sbjct 258487 GACACCATCGATAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCA 258545 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || || || || || || |||| || ||| | ||| ||||| Sbjct 258546 GCAGCGCCTGATTTTCGCGGGTAAGCAGCTTGAGGACGGCCGGACTCTGTCCGACTACAA 258605 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 258606 CATTCAGAAGGAGTCCAC 258623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008236448148