Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20terreus_20[genbank_20GCA_5F001931935.1_202017-01-04] 331 sequences; 31,588,614 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq37 100 2e-16 seq25 82.4 6e-11 >seq37 Length=470994 Score = 100 bits (110), Expect = 2e-16 Identities = 391/621 (63%), Gaps = 29/621 (5%) Strand=Plus/Minus Query 29633 TCGAGCTGAATCCT-CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGT 29691 |||||||| |||| ||| || || | |||||| ||||| ||| | || |||| ||| Sbjct 235797 TCGAGCTGC-TCCTGCAGGGGCTCGAGGTGGTCGCAGTAGATGTGGGTGTCGCCCATGGT 235739 Query 29692 GTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGA 29751 |||||| || || || | || ||| | ||| || | ||||| ||||||||| | Sbjct 235738 GTGGACGAAGGAGCCGGGGTTGAGGTCGGCGGTGTGGGCGAGCATGTGCGTGAGGAGGGC 235679 Query 29752 GTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTG 29811 |||| ||||||||| || || | ||||| | |||| | || | |||||| | | Sbjct 235678 GTAGGAGGCGATGTTGAAAGGGAGGCCGAGGGCGGTGTCGACGGAGCGCTGGTACATGAG 235619 Query 29812 GCACGAGAGC-------TCT--------CCGTCGCTCA------CGTAAAACTGAC---A 29847 |||||||| ||| |||||| | |||| ||||| | Sbjct 235618 ACACGAGAGGGAGCCCTTCTTGTCGGGGCCGTCGGGGAACGAGACGTAGAACTGGGCGAA 235559 Query 29848 CATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACAC 29907 |||| ||||| || || |||||||| |||||| || |||||||| | | Sbjct 235558 CATG---TGGCAAGGGGGCAGGGCCATCTTGGACAAGTCGGCCGGATTCCAGGCGGAGAG 235502 Query 29908 GATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATC 29967 ||||||||| | || ||| | | | | | ||| ||| |||||| || Sbjct 235501 GATGATGCGGCGATCGAACGGGGCCTCCTTCAGCTTGCGTACGACGTCGGCCAGCTGGTC 235442 Query 29968 CACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCA 30027 || ||| |||| |||||| | | || || | ||| Sbjct 235441 GACGCCCTGGCCCGTGTAGTCGGTGTTGGCGTCGACGTACTCTGCGCCAAAGTGGCGCCA 235382 Query 30028 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 30087 ||||||||||||||| || |||||||| || |||| | |||| | |||| |||||| Sbjct 235381 CTGGAACCCGTACACGGGACCCAGGTCGCCGACTTCGCGGTGCAACAGGCCCACCTTGTC 235322 Query 30088 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 30147 | ||| || | | |||||| ||||||||||||| || |||| || || || | Sbjct 235321 GAGAAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTGGTCCGACAGGGGCTG 235262 Query 30148 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30207 ||| ||| | || || |||||| || ||||| | | |||| | ||||| Sbjct 235261 CGAGGACGTGCAGCCCGAGATGAACCAGAGGAGCTCGGCGATGACGCCGCGGAGGAAGAC 235202 Query 30208 CCTCTTGGTCGTGAGGAGGGG 30228 | |||||| ||||||||||| Sbjct 235201 GCGCTTGGTAGTGAGGAGGGG 235181 >seq25 Length=252206 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 53479 TGACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGA 53538 ||||| | |||| | |||||||| | || |||| ||| | || |||| || || Sbjct 213973 TGACGACCTGAAGTTTGTCAAGGTCCGCATGCGGACAACCAAGATTCCCCAGATCGGTGA 213914 Query 53539 CAAGTTTGCATC-CTTCACGGCGCAAAAGGGGAC-ATGCGGAGCGG-TCCTGACTCAGGA 53595 ||| || || || | |||||| || ||||| || || | | | | | ||| |||| Sbjct 213913 CAAATTCGCTTCTCGTCACGGA-CAGAAGGGTACGATTGGTATCACCTACCGAC--AGGA 213857 Query 53596 GGACATGCCCTTCGACAAGGACGGG-GTGGTGCCCGACCTCATCATCAACCCCCACGCCT 53654 |||||||| ||| ||| || ||| |||| |||||| || |||||||||||||||||| Sbjct 213856 AGACATGCCGTTC-ACACGGGAGGGAGTGGCGCCCGATCTGATCATCAACCCCCACGCCA 213798 Query 53655 TTCCCTCCAGGATGAC 53670 ||||||| | ||||| Sbjct 213797 TTCCCTCTCGTATGAC 213782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161561512266