Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq71 208 9e-49 seq100 100 3e-16 >seq71 Length=90593 Score = 208 bits (230), Expect = 9e-49 Identities = 590/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | |||| ||| || || ||||| || || | || | | Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| || Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 ||||| | || ||| |||||| || || ||||| |||||| | ||| | | Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| | ||||| || |||| ||| |||| | | | ||||| || || |||||||| Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 || || | ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309 | ||| ||||| || || ||| || | ||||| || || ||||| Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || ||||| ||| |||| | | || || || || || || | | ||| || Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||||| || | ||||||||||| || || || |||| | || | |||| ||| || Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186 Query 54490 CTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 54547 ||| || || || |||| |||| ||||| || || || |||||||| |||| | Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 ||||| || | ||| | | ||| ||| ||| |||||||||||| || | || Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304 Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667 || || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | | Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364 Query 54668 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 54727 || || ||| | || | || || | || || || || | ||||| Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424 Query 54728 TTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCA-CTA-AATAGtttttttG 54785 || || || |||||||||| | | ||| || || || | | || | || || | Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482 Query 54786 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| ||||| || || || |||||||| | || || || ||||||||||| || || Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 >seq100 Length=80470 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| ||||||||||| | | || | |||||||| || ||||| || ||||| | || Sbjct 36658 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 36599 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 |||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| || || || Sbjct 36598 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGC 36539 Query 24269 CGCAAAGGCAATAAG 24283 || ||||| | ||| Sbjct 36538 GGCGAAGGCCACAAG 36524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593713785139440