Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017-
07-31] 1,053 sequences; 31,330,139 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq71 208 9e-49
seq100 100 3e-16
>seq71
Length=90593
Score = 208 bits (230), Expect = 9e-49
Identities = 590/898 (66%), Gaps = 10/898 (1%)
Strand=Plus/Plus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
||||||||||| || | |||| ||| || || ||||| || || | || | |
Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069
|| || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| ||
Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
||||| | || ||| |||||| || || ||||| |||||| | ||| | |
Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
| ||| | ||||| || |||| ||| |||| | | | ||||| || || ||||||||
Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
|| || | ||||| || ||||| || | || | | ||| |||| ||||||||||||
Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309
| ||| ||||| || || ||| || | ||||| || || |||||
Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
|| || || || | || ||||| | || || || | || || ||||| || ||
Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429
|| ||||| ||| |||| | | || || || || || || | | ||| ||
Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126
Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489
||||| || | ||||||||||| || || || |||| | || | |||| ||| ||
Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186
Query 54490 CTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 54547
||| || || || |||| |||| ||||| || || || |||||||| |||| |
Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244
Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607
||||| || | ||| | | ||| ||| ||| |||||||||||| || | ||
Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304
Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667
|| || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | |
Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364
Query 54668 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 54727
|| || ||| | || | || || | || || || || | |||||
Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424
Query 54728 TTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCA-CTA-AATAGtttttttG 54785
|| || || |||||||||| | | ||| || || || | | || | || || |
Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482
Query 54786 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||| ||||| || || || |||||||| | || || || ||||||||||| || ||
Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540
>seq100
Length=80470
Score = 100 bits (110), Expect = 3e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208
||| ||||||||||| | | || | |||||||| || ||||| || ||||| | ||
Sbjct 36658 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 36599
Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268
|||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 36598 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGC 36539
Query 24269 CGCAAAGGCAATAAG 24283
|| ||||| | |||
Sbjct 36538 GGCGAAGGCCACAAG 36524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593713785139440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |