Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq297 131 1e-25 seq578 95.1 1e-14 seq611 86.0 5e-12 >seq297 Length=30052 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||||| || || ||||||||||| ||| | |||||| ||||||| Sbjct 4704 ACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCG 4763 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| | ||||||||| || ||||| ||||||||||| || | Sbjct 4764 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGA 4823 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| || ||||||||| | ||| | || ||| Sbjct 4824 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGTCTTG 4883 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || ||||| || || || ||||||||| Sbjct 4884 CCAGTGAGAGTCTTGACGAAGATCTGCATG 4913 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || |||| ||||| ||| ||| ||||| |||||||||||| Sbjct 3925 CCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAG 3984 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || ||| || || ||||| || |||||| |||||||||||||||| || || || Sbjct 3985 AGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 4044 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||||||| || || || || | |||| ||||| | | ||| ||| Sbjct 4045 ATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACC 4104 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || ||||| || || || || || |||||||| Sbjct 4105 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| ||||| ||||| ||||||||||| || || || ||| || | Sbjct 4172 CAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATCTTCAA 4231 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | || ||||| || | ||||||||||||||||| || || ||||||||||| || || Sbjct 4232 GTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAA 4291 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| |||||| | ||| ||||| | || | || || | Sbjct 4292 TCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGTCTTTC 4351 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||||| || || ||||||||||| Sbjct 4352 CGGTGAGAGTCTTAACGAAAATCTGCAT 4379 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| ||| || |||||| || || ||||| || ||| Sbjct 4411 GTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCTTCCAGCTGCTTACCA 4470 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||| || |||||||| |||||||| || ||||||||||| Sbjct 4471 GCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 4514 >seq578 Length=126255 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||| ||||| || |||||| |||| Sbjct 60546 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 60487 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || || ||||||||||| || || || || | ||| Sbjct 60486 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 60427 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | ||| || |||| ||| | || || || ||||| || || || ||| Sbjct 60426 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 60367 >seq611 Length=248973 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | || || ||||| Sbjct 196837 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCCTC 196896 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct 196897 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 196956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433824832464676