Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq297 120 3e-22 seq578 100 3e-16 >seq297 Length=30052 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| |||| || | ||||||||||||||| || |||||||| | || |||||| | Sbjct 3936 ACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCC 3995 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| ||||| ||||||||||| | || | || ||||| Sbjct 3996 GTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTT 4055 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || || | | | | ||||| || || || || | || || Sbjct 4056 GTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACCTCCAGTGTAAT 4115 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || ||||| || ||||| ||||| Sbjct 4116 GGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 116 bits (128), Expect = 4e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | || ||| || |||| || ||||||||||||||||| Sbjct 4417 TCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAG 4476 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 4477 ATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 4536 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| |||||||| || | |||||||| ||||| || || ||||| || Sbjct 4537 TCAATTGTGTCGCTGGATTCCACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAAC 4595 Score = 105 bits (116), Expect = 8e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||| || | ||||| || | || || |||||||| |||||||| Sbjct 4722 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 4781 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | ||||||||||| | || | || |||||| ||| ||| | || | |||| | Sbjct 4782 ATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC-TGAATCTTCGACTTGACATT 4840 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 4841 GTCAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGAC 4900 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 4901 GAAGATCTGCAT 4912 >seq578 Length=126255 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 60548 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 60489 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 60488 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 60430 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 60429 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 60370 Query 43173 AA 43174 || Sbjct 60369 AA 60368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810073450840