Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq297 131 1e-25 seq611 89.7 3e-13 >seq297 Length=30052 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| |||||||| | |||| ||| ||||| |||||||||||||| Sbjct 4686 CCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAG 4745 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || | ||||||||||| || Sbjct 4746 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 4805 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | | || | ||| | || ||||| Sbjct 4806 ATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACC 4865 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| |||||||| || || ||||||||||| Sbjct 4866 TCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34161 ATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG 34220 |||| ||||| || | ||| |||||||| | || || || || || |||||||| |||| Sbjct 3923 ATCCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGG 3982 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | || || |||| |||| |||||| || ||||| ||||| ||||||||||| || Sbjct 3983 AGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGG 4042 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | | || | || | || || | Sbjct 4043 GAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAA 4102 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||| || |||||||| || || || ||||||||||| Sbjct 4103 CCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || ||| ||||| ||||||||||||||| Sbjct 4381 CCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 4440 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| |||| |||||| || ||||| || || |||||||||||| || Sbjct 4441 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 4500 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | || | ||| | ||||| || Sbjct 4501 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCACC 4560 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| ||||| || || || Sbjct 4561 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAAC 4595 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || || || || | || || || || |||||||| || ||| Sbjct 4153 CCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGAC 4212 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | |||| | || || | ||||| || || |||||||| |||||||| || ||| Sbjct 4213 AAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGA 4272 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | | || | || | || || || Sbjct 4273 ATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACC 4332 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || ||||||||||| || || || |||||||| Sbjct 4333 TCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 >seq611 Length=248973 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || ||||| ||||||||||| || Sbjct 196820 CCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 196879 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 196880 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 196939 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 196940 ATTCCCTCCTTGTC 196953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067853875680