Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq71 259 4e-64 seq100 129 5e-25 seq297 107 2e-18 seq578 82.4 7e-11 >seq71 Length=90593 Score = 259 bits (286), Expect = 4e-64 Identities = 441/638 (69%), Gaps = 6/638 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| ||||| |||||||| || ||||| | Sbjct 32723 TCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGCATAGAACAGATCACGGGCTCTG 32782 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| || ||| |||||| | |||||| || || || || || || ||||| Sbjct 32783 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAAGACATCGGCGTGCCAA 32842 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| ||||||| |||||| ||||| || | |||||| || || || ||||| || | | Sbjct 32843 GGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCTTGGTCGACATATCTG 32902 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| |||| | ||||| || || | ||| ||||| | ||| ||| Sbjct 32903 GCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAAGAACCGTTGGTGCCA 32962 Query 23582 GCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641 | | || ||| | || || | | |||||||| | ||| || || ||| | | Sbjct 32963 CCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGTC 33022 Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701 ||||| ||||| || || ||||| ||||||||||| || |||||||| ||||| || Sbjct 33023 TTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCTTC 33082 Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761 | |||| | ||| || |||| || |||| || ||| ||| | || |||||| || Sbjct 33083 ATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACCAGCATTGAACAGAGTA 33142 Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821 || || || || |||||| | ||||| |||| ||| || || ||||| || Sbjct 33143 GGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTCG 33202 Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CG 23878 || || | ||||| ||||||| ||| || ||||||| || || || || | || | Sbjct 33203 ATATCATTACCGTGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTCAGCA 33262 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 ||| | ||||| ||| | || || || || | | || || || || ||| || Sbjct 33263 ACCTT---TCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTCTTGAAGCCGAAAAAG 33319 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| ||||||||||||| || || || || || Sbjct 33320 TTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTT 33357 Score = 114 bits (126), Expect = 1e-20 Identities = 442/687 (64%), Gaps = 13/687 (2%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || |||||||| |||| | ||| | |||| || || || |||||||| ||| Sbjct 31436 TCAACAGTAAACTGAATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATGCCAGTC 31495 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 |||||||||||||||||| | ||| || || || | || || | ||| Sbjct 31496 TTCAGACCCATCTTCCACCCAGCAAAGTGCATGCTGGTGAGCTTGCCCATGGTAGGCTCC 31555 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || || || |||| |||||| ||| || || ||||| || || ||||||||||| Sbjct 31556 TTCAGGTGAACGTTGAGAGACTGAGACTGGTCAATGAACGCACCACGGTCGGCGGCCATT 31615 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | | | |||||| || | |||||| ||||||||||| || | |||| || Sbjct 31616 TGCAGGATGGTACGCTGAGAGAGTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCG 31675 Query 22349 GGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCG 22406 || || ||| | || |||| ||||| || | ||||| || || || Sbjct 31676 GGAAT--ATTGGGAATGTTCTGAACGGAACCACCGTCCGCGATGATACGGTTCTTCATGT 31733 Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466 | || ||| | ||| | | || | ||| || | || |||| || || || | Sbjct 31734 TGTCCGACCAGAGACCAAGGTCGACAAGATCCTTAAGAAGCCAGGGGTTGACGACCTGGA 31793 Query 22467 ACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 |||| || | |||| || ||||| ||| ||||| || ||| | || |||||| |||| Sbjct 31794 ACTCTCCAG-CAAGCACACGGCGAGAGTAGATGTTCGAGGTGTAGGGCTCGAAACATTCG 31852 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||| ||||| ||||| ||| || || |||||||| |||| || | ||| Sbjct 31853 TTGAAGCCCAGAATCTGGCTGGTGCTTGCAGTGGGCATCGGTGCCACCAACAAACTGTTG 31912 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGACG 22643 | || ||| || | || || ||| ||||||| ||||||||| || || | | Sbjct 31913 CGCACACCGCTCTGAGCGATCTTCGCCTTCAGAGCATC--CCAGTCCCAGAGGTCCGTGG 31970 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 |||| |||||||||| || || || | | || || | ||| ||| |||| Sbjct 31971 GCGT---TCTGTCCCACATGTCATACTGAAGAATACCTTGAGAGACGGGGGAGCCCTCGT 32027 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763 | ||||| || || ||| | | ||| || || || || ||| || |||| || Sbjct 32028 AGGTTTCATAAGGGCCAAACTCCTTGGCCAGCTCACACGAAGCAGTCAAAGCACCGTGAT 32087 Query 22764 ATATAGTCTCGAAGATTTTCTTGTTCA 22790 | || ||||| ||||| | |||||| Sbjct 32088 AGATGGTCTCAAAGATCTGGATGTTCA 32114 >seq100 Length=80470 Score = 129 bits (142), Expect = 5e-25 Identities = 239/346 (69%), Gaps = 6/346 (2%) Strand=Plus/Plus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || |||||| || | || | || |||||||| || || || || ||||| || || Sbjct 36509 ACTTTCGCCCAGCGTCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTCTTCTCCGGATCT 36568 Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079 ||||| | || || ||| ||||||| || || ||||||| || || || || |||| Sbjct 36569 TTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGATTGATGCCTGGTCTCACTTTCTCCAAC 36628 Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 ||| | || || || ||||||||||| || || || ||||| ||||| ||| ||||||| Sbjct 36629 GAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCTTGCCTCCTGTTCTCTCAC 36688 Query 58140 ATTG--TCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCG 58196 ||| ||| | ||| | | | | | |||||| ||| ||||| || || Sbjct 36689 -TTGAATCATCGCCCTGACAAGAAGGTTG--TTGAGGACATCATCGTTGAGGCTGTGGCC 36745 Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256 || ||| | ||||| | || || || || || || || | || || |||||| | | Sbjct 36746 ATTGAACAGGAGTTCTTAACAGACGCTCTTCCTGTCGCTCTCCTTGGCATGAACTCTAAG 36805 Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 |||||| ||||||||||||| ||||||||| | || || ||| Sbjct 36806 CTGATGTGCCAGTACATTGAGTTCGTTGCCGACCGGCTGCTGGTCG 36851 >seq297 Length=30052 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || ||||| | || || ||| | ||||| | | Sbjct 4597 TCGTTAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCCAGCGACACAATTG 4538 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | ||||| || || ||||||||| || | || |||||||||||||| || | Sbjct 4537 ATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGA 4478 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | |||||||| || ||| |||||||| ||| || ||| || ||||| || || | Sbjct 4477 TCTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGTCCGACTACAACATCCAGAAGG 4418 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||| ||||| || || ||| | ||| | || |||| Sbjct 4417 AATCGACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA 4379 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || ||||| || |||||| | || || || | Sbjct 4913 CATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCCAG 4854 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || || ||| ||||| ||| | || || ||||| Sbjct 4853 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCA 4794 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||||||||| ||| | || || ||| | ||| || || Sbjct 4793 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAA 4734 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || ||||| ||||| || ||||| || Sbjct 4733 CATTCAGAAGGAATCTACTCTGCACCTGGTTCT 4701 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || || || | || ||||| | || Sbjct 4151 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 4092 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | || || ||| || | | |||||||||||| | || || ||| Sbjct 4091 GACACAATCGACAATGTGAA---GAGCAAGATCCAAGACAAGGAAGGCATTCCCCCAGAC 4035 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || |||||||| || ||| |||||||| ||| | |||||| Sbjct 4034 CAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGGACCCTCTCCGATTAC 3975 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || || || || ||||| || Sbjct 3974 AACATCCAAAAGGAGAGCACACTCCACCTGGTTCT 3940 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || ||||| | || ||||| | || Sbjct 4379 ATGCAGATTTTCGTTAAGACTCTCACCGGAAAGACTATCACATTAGAGGTTGAGTCTTCA 4320 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| ||| | || || || ||| Sbjct 4319 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 4260 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || || | ||||| || || ||||| ||| Sbjct 4259 CAGCGTCTCATTTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAC 4200 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || |||||||| || || | ||| | || |||| Sbjct 4199 ATCCAAAAGGAGTCCACACTTCATCTTGTCCTCCGTCTGCGCGGTGGTA 4151 >seq578 Length=126255 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||||||||| || ||||| | Sbjct 60367 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 60426 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || ||||||||||| || Sbjct 60427 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 60486 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || ||||| || || Sbjct 60487 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 60546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760532599760