Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq71 208 1e-48 seq100 109 7e-19 >seq71 Length=90593 Score = 208 bits (230), Expect = 1e-48 Identities = 590/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || |||||||| || | |||| ||| | || ||||| || || | || | | Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| || Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | ||| |||||| || || ||||| |||||| | ||| | | Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | ||||| || |||| ||| ||||| | | | ||||| || || |||||||| Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 ||| ||||| || || ||| || | ||||| || || ||||| Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607 || || || || | || ||||| | || || || | ||||| ||||| ||||| Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066 Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667 |||||||| || |||| | | || || || || || || | | | ||| || Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126 Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63727 ||||| || | ||||||||||| || || || |||| | || | |||| ||| || Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186 Query 63728 CTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 63785 |||||| || || |||| |||| ||||| || || || |||||||| |||| | Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244 Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845 ||||| || | ||| ||| || ||| ||| || ||||||||| || | || Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304 Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTA 63905 || || || ||| ||||||| ||||| || ||||| | |||| | || ||||||| | Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364 Query 63906 TCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 63965 || || ||| | || || || || | || || || || | ||||| Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424 Query 63966 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttG 64023 || || || || ||||||| | | | ||| || || || | | || | || || | Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482 Query 64024 TTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 ||| |||||| || || || | |||||| | ||| || || ||||||||||| || || Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 >seq100 Length=80470 Score = 109 bits (120), Expect = 7e-19 Identities = 300/458 (66%), Gaps = 10/458 (2%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || || ||||| ||||| ||||| || || || || || || |||||| | Sbjct 36976 CATAACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 36917 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 || || ||| |||||||||| || || || |||| | ||||| || || ||| Sbjct 36916 CAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGTAGTACTTCTTGTTTCC 36857 Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457 | | | || | || || ||||| || || || ||||| | | | || Sbjct 36856 GAGGGCGACCAGCAGCCGGTCGGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTT 36797 Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517 ||| || | ||| || |||||||| | || | || || |||||||||| || || Sbjct 36796 CATGCCAAGGAGAGCGACAGGAAGAGCGTCTGTTAAGAACTCCTGTTCAATGGCCACAGC 36737 Query 33518 ATT-----TGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTA 33572 | || | | | || ||| | | ||| || |||| || || Sbjct 36736 CTCAACGATGATGTCCTCAAC--AACCTTCTTGTCA---GGGCGATGATTCAAGTGAGAG 36682 Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| | || || || || ||||||||||||||| | | || | ||||| || Sbjct 36681 AACAGGAGGCAAGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 36622 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| | |||||||| || ||||| || |||||||| || |||||| Sbjct 36621 AAAGTGAGACCAGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCG 36562 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33730 || ||||||||||| || || || || ||||| | ||| Sbjct 36561 GAGAAGAAGATTCCCTCCACAGCGGCGAAGGCCACAAG 36524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809310025840