Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq71 199 5e-46 seq100 100 4e-16 >seq71 Length=90593 Score = 199 bits (220), Expect = 5e-46 Identities = 588/898 (65%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || |||||||| || | |||| ||| || || ||||| || || | || | | Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 66100 || || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| || Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 | ||| | || ||| |||||| || || ||||| |||||| | ||| | | Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 | ||| ||||| || |||| ||| ||||| | | | ||||| || || |||||||| Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 || || | ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACC 66340 | ||| ||||| || || ||| || | ||||| || || ||||| Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || ||||| ||| |||| | | || || || || || || | | ||| || Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 ||||| || | ||||||||||| || || || |||| | || | |||| ||| || Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186 Query 66521 CTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 66578 |||||| || || |||| |||| ||||| || || || |||||||| |||| | Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244 Query 66579 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 66638 ||||| || | ||| | | ||| ||| ||| || ||||||||| || | || Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304 Query 66639 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 66698 || || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | | Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364 Query 66699 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 66758 || || ||| | || | || || | || || || || | ||||| Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424 Query 66759 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttG 66816 || || || |||||||||| | | | ||| || || || | | || | || || | Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482 Query 66817 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 ||| ||||| || || || |||||||| | || || | ||||||||||| || || Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 >seq100 Length=80470 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| ||||||||||| | | || | |||||||| || ||||| || ||||| | || Sbjct 36658 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 36599 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 |||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| || || || Sbjct 36598 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGC 36539 Query 36292 CGCAAAGGCAATAAG 36306 || ||||| | ||| Sbjct 36538 GGCGAAGGCCACAAG 36524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164136800520