Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq297 96.9 3e-15 >seq297 Length=30052 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||||||||| | |||||||| ||||| ||||| | || || | ||| || |||||||| Sbjct 4188 CTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAA 4247 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATC-AACTCTTTGACT 43035 ||| | ||||| ||||| | || | || || || || ||| ||| ||| ||||| Sbjct 4248 AATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATC-CTGAATCTTGCTC-TTGACA 4305 Query 43036 CTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTC 43095 || | | ||||| || ||| || |||| || ||||| |||||||| ||||| || Sbjct 4306 TTGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTA 4365 Query 43096 ACAAAAATTTGCAT 43109 || ||||| ||||| Sbjct 4366 ACGAAAATCTGCAT 4379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381364705717074