Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq100 87.8 2e-12 seq297 82.4 8e-11 >seq100 Length=80470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 298/459 (65%), Gaps = 13/459 (3%) Strand=Plus/Plus Query 50403 TACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAG 50462 |||||| ||| | ||| | ||||| || ||| || || || | || || ||||| Sbjct 36508 TACTTTCGCCCAGCGTCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTCTTCTCCGGATC 36567 Query 50463 CTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCA 50521 ||||| |||| || | | || || | | || | ||||| || ||||| || || Sbjct 36568 TTTTGCTTCCATCTTCTGGCTGAAGAAGCGT-GGATTGATGCCTGGTCTCACTTTCTCCA 36626 Query 50522 ACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATA 50581 ||||| | || || || ||||| || ||||||| |||||||| || || | | Sbjct 36627 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCTTGC-----CTCCTGTT 36681 Query 50582 CGCGCGTAAATGAAAAATTATCAT-ACGAAACAATTTT---GGACATGTTCAAAGAAGCC 50637 | | | | |||| || | | || | | || | |||||| || || || Sbjct 36682 CTCTC--ACTTGAATCATCGCCCTGACAAGAAGGTTGTTGAGGACATCATCGTTGAGGCT 36739 Query 50638 GTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAAC 50697 || | ||| ||| | ||||| || || |||||| | || || || | | ||||||||| Sbjct 36740 GTGGCCATTGAACAGGAGTTCTTAACAGACGCTCTTCCTGTCGCTCTCCTTGGCATGAAC 36799 Query 50698 GCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGA 50757 | | |||||||| ||||||||||||| ||||| ||| | || || | || ||| Sbjct 36800 TCTAAGCTGATGTGCCAGTACATTGAGTTCGTTGCCGACCGGCTGCTGGTCGCCCTCGGA 36859 Query 50758 CAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAG 50817 | ||| ||||| || | | |||||||| || ||| | | || ||| ||| Sbjct 36860 AACAAGAAGTACTACAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTGGCA 36919 Query 50818 GGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 || || || ||||| || || | ||||| || || ||| Sbjct 36920 GGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTAC 36958 >seq297 Length=30052 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||||| ||| | || | ||| || ||||| |||||||||||| Sbjct 3925 CCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAG 3984 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | | |||||| || || |||||||| |||| ||||| ||||| || || || Sbjct 3985 AGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 4044 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| || || || | | || | ||||| | || || || Sbjct 4045 ATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACC 4104 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| ||||| | ||| || ||||| || |||||| Sbjct 4105 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCATA 4152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507007726422960