Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017-
07-31] 1,053 sequences; 31,330,139 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq297 131 4e-25
>seq297
Length=30052
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| |||||||| || ||||| || ||||| | || || || || || || |||
Sbjct 4716 GTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 4775
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || |||||||| || || || |||||||||||||| | ||
Sbjct 4776 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 4835
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||||| | || ||||||| || || ||||| ||||| || ||
Sbjct 4836 ACATTGTCAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTC 4895
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 4896 TTGACGAAGATCTGCAT 4912
Score = 129 bits (142), Expect = 1e-24
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||| || || || || || || || ||||| | || | || |||
Sbjct 4168 AGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATCT 4227
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||| |||||||| || | ||| ||||| || || || || || ||||||
Sbjct 4228 TCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 4287
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| ||||| || ||||| || | ||| || || || ||||||| ||| |||||
Sbjct 4288 TGAATC-TTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGT 4346
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || || || ||||||||
Sbjct 4347 CTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151382865836524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |