Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq508 140 2e-28 seq297 129 4e-25 seq378 87.8 1e-12 >seq508 Length=7586 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2432 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2491 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2492 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2526 >seq297 Length=30052 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||| | || | |||||| ||| ||||||||| || |||||||||| Sbjct 4151 TACCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAG 4210 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||| ||||||||||| || || || || ||||| | || Sbjct 4211 ACAAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGG 4270 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||| || || ||| ||| || ||| ||||| | || || ||| | |||| Sbjct 4271 GAATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAA 4330 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| ||||| || || || | || || ||||| |||||||| Sbjct 4331 CCTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 >seq378 Length=142200 Score = 87.8 bits (96), Expect = 1e-12 Identities = 178/264 (67%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 ||||| || ||||| ||| |||| || ||||| | || || ||||| |||||||| Sbjct 124062 TTCTATCGTTACAAGATGGAGCGCCTCCAGTCCAAGATTGAAGGCAAGGGTAACGGTATC 124003 Query 6261 AAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCAC 6316 || ||||| | |||||| ||||| |||||| || | | | || ||| | | Sbjct 124002 AAGACCGTGGTCGTCAAC----CTGAACTCGGTCGCTCAGTCTTTGAGCCGTCCTCCGTC 123947 Query 6317 CTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAA 6376 || || || || ||||| | |||||||| |||||| | | | | | || | Sbjct 123946 TTATGTGATCAAGTACTTCGGATTTGAACTTGGTGCTCAGGCTAACGCTAAGCCCACCGA 123887 Query 6377 CGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGG 6436 || |||| ||| | ||||| | || | |||||||||| ||||| | ||||| || Sbjct 123886 TGATCGCTGGATCATCAACGGCGCCCACGATGCTGCCAAGCTTCAGGATTACCTTGATGG 123827 Query 6437 CTTTATTCGCAAGTTTGTGCTGTG 6460 ||| || |||||||||||| || Sbjct 123826 CTTCATCGCCAAGTTTGTGCTTTG 123803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334942901476043