Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq71 217 2e-51 seq100 100 4e-16 >seq71 Length=90593 Score = 217 bits (240), Expect = 2e-51 Identities = 592/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || |||||||| || | |||| |||| || || ||||| || || | || | | Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| || Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | || ||| |||||| || || ||||| |||||| | ||| | | Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| | ||||| || |||| ||| ||||| | | | ||||| || || |||||||| Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 || || | ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 | ||| ||||| || || ||| || | ||||| || || ||||| Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || | || ||||| | || || || | || || ||||| || || Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471 || ||||| ||| |||| | | || || || || || || | | ||| || Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126 Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531 ||||| || | ||||||||||| ||||| || |||| | || | |||| ||| || Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186 Query 63532 CTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 63589 |||||| || || |||| |||| ||||| || || || |||||||| |||| | Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649 ||||| || | ||| | | ||| ||| ||| || ||||||||| || | || Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304 Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709 || || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | | Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364 Query 63710 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCA 63769 || || ||| | || | || || | || || || || ||||| Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424 Query 63770 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttG 63827 || || || |||||||||| | | | ||| || || || | | || | || || | Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482 Query 63828 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 ||| ||||| || || || |||||||| | || || || ||||||||||| || || Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 >seq100 Length=80470 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| ||||||||||| | | || | |||||||| || ||||| || ||||| | || Sbjct 36658 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 36599 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 |||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| || || || Sbjct 36598 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGC 36539 Query 32795 CGCAAAGGCAATAAG 32809 || ||||| | ||| Sbjct 36538 GGCGAAGGCCACAAG 36524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623659818800