Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017-
07-31] 1,053 sequences; 31,330,139 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq71 217 2e-51
seq100 100 4e-16
>seq71
Length=90593
Score = 217 bits (240), Expect = 2e-51
Identities = 592/898 (66%), Gaps = 10/898 (1%)
Strand=Plus/Plus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| |||||||| || | |||| |||| || || ||||| || || | || | |
Sbjct 32648 TCAAACTCGTCGCCATAGACATCTGCCAGGCCGGGGGCTTCATTGGGGCAGAACAGAGTC 32707
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111
|| || |||| || ||||| ||||| || ||||||||| |||| ||||| ||| ||
Sbjct 32708 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAA 32766
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
||||| | || ||| |||||| || || ||||| |||||| | ||| | |
Sbjct 32767 CAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAA 32826
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
| ||| | ||||| || |||| ||| ||||| | | | ||||| || || ||||||||
Sbjct 32827 GACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCC 32886
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
|| || | ||||| || ||||| || | || | | ||| |||| ||||||||||||
Sbjct 32887 TTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGA 32946
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351
| ||| ||||| || || ||| || | ||||| || || |||||
Sbjct 32947 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACC 33006
Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411
|| || || || | || ||||| | || || || | || || ||||| || ||
Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471
|| ||||| ||| |||| | | || || || || || || | | ||| ||
Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126
Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531
||||| || | ||||||||||| ||||| || |||| | || | |||| ||| ||
Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186
Query 63532 CTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATG 63589
|||||| || || |||| |||| ||||| || || || |||||||| |||| |
Sbjct 33187 CTCAATGGCCTTTTCGATAT--CATTACCGTGAATACCGACGGCAACACGCATCAACAAG 33244
Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649
||||| || | ||| | | ||| ||| ||| || ||||||||| || | ||
Sbjct 33245 TGCTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTC 33304
Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63709
|| || || ||| ||||||| ||||| || ||||| | |||| | |||||||| | |
Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCA 33364
Query 63710 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCA 63769
|| || ||| | || | || || | || || || || |||||
Sbjct 33365 TCAGCATGTTTCATGACAATTTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTG 33424
Query 63770 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttG 63827
|| || || |||||||||| | | | ||| || || || | | || | || || |
Sbjct 33425 TTCTTGGGGTTGACATAGTGGTAGAGGTCCGAGATGAC--CAGCGAGAACTGCTTCTTGG 33482
Query 63828 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
||| ||||| || || || |||||||| | || || || ||||||||||| || ||
Sbjct 33483 TTTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540
>seq100
Length=80470
Score = 100 bits (110), Expect = 4e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| ||||||||||| | | || | |||||||| || ||||| || ||||| | ||
Sbjct 36658 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCC 36599
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
|||||| || ||||| || ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 36598 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGC 36539
Query 32795 CGCAAAGGCAATAAG 32809
|| ||||| | |||
Sbjct 36538 GGCGAAGGCCACAAG 36524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633623659818800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |