Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq297 123 2e-23 >seq297 Length=30052 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| ||| | ||||| || || |||| | || || || | | Sbjct 4379 ATGCAGATTTTCGTTAAGACTCTCACCGGAAAGACTATCACATTAGAGGTTGAGTCTTCA 4320 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| || |||||||| ||||| || ||||| Sbjct 4319 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAG 4260 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || || | || ||| ||| ||| | || ||||||||| Sbjct 4259 CAGCGTCTCATTTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAC 4200 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || ||||| | ||| | || | || ||||||| ||| Sbjct 4199 ATCCAAAAGGAGTCCACACTTCATCTTGTCCTCCGTCTGCGCGGTGGT 4152 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| | || || || ||| | Sbjct 4912 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCCAGC 4853 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||| || |||||||| || || || || || Sbjct 4852 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 4793 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || ||||| ||| | |||||| |||||| ||||||| |||||| Sbjct 4792 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 4733 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| || ||||| || | || | ||| |||| Sbjct 4732 ATTCAGAAGGAATCTACTCTGCACCTGGTTCTGCG 4698 Score = 102 bits (112), Expect = 7e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || | || || || || |||||||||| |||||| ||| ||| || | || Sbjct 4595 GTTAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCCAGCGACACAATTGAT 4536 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || || |||||||||||||| || ||||| || || || || || Sbjct 4535 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGATC 4476 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || || || ||| | || || |||||| | ||||| |||||||| || || ||| Sbjct 4475 TTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGTCCGACTACAACATCCAGAAGGAA 4416 Query 22411 TCCACC 22416 || ||| Sbjct 4415 TCGACC 4410 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || | || || || || || || | Sbjct 4151 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 4092 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || ||||||||||| || ||||| || || || Sbjct 4091 GACACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 4032 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | || || || ||| |||||||||||||| Sbjct 4031 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGGACCCTCTCCGATTACAAC 3972 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || ||| | || | ||| |||| | ||||| || Sbjct 3971 ATCCAAAAGGAGAGCACACTCCACCTGGTTCTGCGTCTCCGCGGTGG 3925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722613446945