Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq297 194 3e-44 seq578 123 5e-23 seq290 104 4e-17 >seq297 Length=30052 Score = 194 bits (214), Expect = 3e-44 Identities = 184/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| ||| ||||| || |||| |||| ||| || ||| ||| ||||||||||| | Sbjct 3917 TTTAACATCCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGT 3976 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||||||||| |||| ||| ||||| | |||||| || ||||| ||||| | || |||| Sbjct 3977 AATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGT 4036 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || |||||||||||||||||||| ||||| ||| || ||||| ||||| | | Sbjct 4037 CTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGG 4096 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||| || ||||| ||||| ||||| ||||||||||| |||||||| Sbjct 4097 ACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || || |||||||| ||||||||||| ||||| || Sbjct 4153 CCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGAC 4212 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| ||||| || ||||| | || || || || ||| Sbjct 4213 AAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGA 4272 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| |||||| ||||||||||||| || || || Sbjct 4273 ATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACC 4332 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || ||||| ||||| ||||| ||||| |||||||| Sbjct 4333 TCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 Score = 154 bits (170), Expect = 3e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| |||| ||| || || || || || || ||||| || |||||| Sbjct 4686 CCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAG 4745 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 4746 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 4805 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| ||||| || |||||||| | |||||| || || ||||| |||| | || || Sbjct 4806 ATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTGGACTCGAC 4864 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || ||||||||||| || || ||||| ||||||||||| |||||||| ||| Sbjct 4865 CTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATGATG 4916 Score = 120 bits (132), Expect = 6e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || || || |||||||| || ||||| Sbjct 4381 CCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 4440 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| | |||||| || ||||| || || | || |||||||| || Sbjct 4441 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 4500 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | |||||| || || ||||| |||| |||| || Sbjct 4501 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATTGTGTC-GCTGGATTCCAC 4559 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||||| || || ||||||||||| |||| Sbjct 4560 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGA 4597 >seq578 Length=126255 Score = 123 bits (136), Expect = 5e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 60546 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 60487 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| ||||||||| ||| Sbjct 60486 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 60427 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 60426 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 60368 >seq290 Length=155085 Score = 104 bits (114), Expect = 4e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||| || || ||||| | || || ||||| | ||| ||| |||| || | || Sbjct 9545 GGGGAAACCTTCAAGCTGCTCGTTGTTGATGGCACGCATCAGAGTAGTCTTACCAGTACC 9486 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 ||| || |||| || |||||| | | || ||||| | | ||| || |||||| Sbjct 9485 GTTAGGTCCGAGAAGACCGTAACGCTGACCACGCTTCAGGCGGAGAGAGGTCTGGTTCAG 9426 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||||||| ||||||||||||||||||| ||| | ||| || |||||||||||||| Sbjct 9425 CAGGATCTTGGCACCATAGGCAAGGGAGAATGTGCAGTTGCAGAGATCCTCACCCTCCTC 9366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921610269145160