Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq297 132 1e-25 seq578 116 9e-21 >seq297 Length=30052 Score = 132 bits (146), Expect = 1e-25 Identities = 171/232 (74%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | || || || || | ||||| || |||||||| || || |||| Sbjct 3924 TCCACCGCGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGA 3983 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | || || || |||||||| |||||||| || ||||| Sbjct 3984 GAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTG---GTCTGG 4040 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATT 288421 | || ||||| || || ||||| || ||| ||||| || || || | || || | Sbjct 4041 GGGAATGCCTTCCTTGTCTTGGATCTT-GCTCTTCACATTGTCGATTGTGTCAGAGGACT 4099 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || ||||| ||||| || ||||||||||| |||||||| Sbjct 4100 CAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 129 bits (142), Expect = 1e-24 Identities = 171/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || || | || ||| || || || || |||| Sbjct 4682 CATG-CCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGT 4740 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| || || || | || || || |||||||||| |||||| || | Sbjct 4741 CGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAG 4800 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || |||||||| || |||| || || || || |||| ||||| || | Sbjct 4801 GAGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACT 4860 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || || | ||||| ||||| || || |||||||||||||| |||||||| ||| Sbjct 4861 CGACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATGATG 4916 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| |||| || ||| || ||||| || ||||||| Sbjct 4381 CCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 4440 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | || || || ||||||||||| ||||| || ||| Sbjct 4441 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 4500 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || || | ||||| ||||| || Sbjct 4501 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCACC 4560 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| ||||| || || || ||||| |||| Sbjct 4561 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGA 4597 >seq578 Length=126255 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 60546 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 60487 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | ||||| || || || |||||||| || || || ||||| || Sbjct 60486 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 60427 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 60426 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 60368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179638484618934