Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq100 98.7 2e-15 seq290 86.0 1e-11 seq312 84.2 5e-11 >seq100 Length=80470 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG-CTTATTGGCATGAACTCTGAACT 243584 ||| |||| ||| | |||||| |||| || || || |||||||||||||| | || Sbjct 36749 GAACAGGAGTTCTTAACAGACGCTCTTCC-TGTCGCTCTCCTTGGCATGAACTCTAAGCT 36807 Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 ||| | |||||||| || ||||| |||||||| | | |||| || || | |||| Sbjct 36808 GATGTGCCAGTACATTGAGTTCGTTGCCGACCGGCTGCTGGTCGCCCTCGGAAACAAGAA 36867 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 |||||||| |||||||| | ||| ||||| || ||||| ||| || || Sbjct 36868 GTACTACAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTGGCAGGAAAGAC 36927 Query 243705 TAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 |||||||| || |||||||| |||| || || | | || ||||| ||| Sbjct 36928 CAACTTCTTTGAGAAGCGTGTTGGTGACTACCAGAAGGCC-GGTGTTATG 36976 >seq290 Length=155085 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| |||| || | | ||| |||||| ||||||||||| || Sbjct 9583 TCGTGCTCAACGTAGACAGTCTTGACCTCGTCCTTCTTGGGGAAACCTTCAAGCTGCTCG 9524 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || || || ||||||||||| | ||||| | ||||| || || |||||||| Sbjct 9523 TTGTTGATGGCACGCATCAGAGTAGTCTTACCAGTACCGTTAGGTCCGAGAAGACCGTAA 9464 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | ||||||||||| || || | |||||| || || || ||||||| || Sbjct 9463 CGCTGACCACGCTTCAGGCGGAGAGAGGTCTGGTTCAGCAGGATCTTGGCACCATAGGCA 9404 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || ||| || | || ||||||||||| Sbjct 9403 AGGGAGAATGTGCAGTTGCAGAGATCCTCACC 9372 >seq312 Length=152250 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 330459 CTTTGCAATATCTGTTCCACTCCCCATGGCACATCCAACGTCTGCCTCCTTAAGAGCCGG 330518 ||| |||| ||| ||||| | ||||||||| |||| || |||| ||| | ||| || Sbjct 32586 CTTAGCAACATCCGTTCCCGTACCCATGGCAACACCAATATCGGCCTTCTTCAAAGCAGG 32527 Query 330519 AGCATCGTTAGCACCATCGCCACTCGATGCAACGACATGACCAAGA 330564 ||||||||| ||||||||||| || |||||| ||||| || ||| Sbjct 32526 AGCATCGTTGACACCATCGCCAGTCATTGCAACCACATGGCCCAGA 32481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102865120425550