Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq297 120 3e-22 seq611 87.8 2e-12 seq71 82.4 8e-11 >seq297 Length=30052 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || ||||| ||||||||||| | || ||| ||| ||||||| |||||||| || || | Sbjct 3961 TCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAG 4020 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| || ||||| ||||| || ||||| || || ||| ||| Sbjct 4021 ATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTG 4080 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| ||| || || || || | || | |||||| ||||| | || || ||| Sbjct 4081 TCGATTGTGTCAGAGGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACG 4140 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 4141 AAGATCTGCAT 4151 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | || || ||||||| || || || ||||| ||||||||||| | Sbjct 4152 ACCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGA 4211 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | |||||||| ||||| |||||| ||||||| |||||||| || || || Sbjct 4212 CAAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGG 4271 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || || | || || Sbjct 4272 AATGCCCTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAAC 4331 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || | ||||| ||||| | ||| || |||||||| ||||| Sbjct 4332 CTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| |||||||| || || |||||||| || | Sbjct 4380 ACCACCACGCAGACGAAGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 4439 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||| |||||||| || || | || || ||||||||||||||||| Sbjct 4440 CAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGG 4499 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | ||| || | || ||||| Sbjct 4500 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCAC 4559 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 || | ||| | ||||||||| || | || || |||| Sbjct 4560 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGA 4597 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || ||||||||||| || | || ||||| | || || ||||||||||| Sbjct 4716 GTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 4775 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||||||||| ||||| || || || || || || || || ||| Sbjct 4776 GCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 4835 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || |||| || | ||||||||| || | ||| Sbjct 4836 ACATTGTCAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTC 4895 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 4896 TTGACGAAGATCTGCAT 4912 >seq611 Length=248973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||||| || || || |||||||| || | Sbjct 196819 ACCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 196878 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || |||| || ||||||||||| || | || || |||||||||||||| || Sbjct 196879 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 196938 Query 64336 AATTCCTTCTTTTTCT 64351 ||||| || || ||| Sbjct 196939 GATTCCCTCCTTGTCT 196954 >seq71 Length=90593 Score = 82.4 bits (90), Expect = 8e-11 Identities = 362/567 (64%), Gaps = 11/567 (2%) Strand=Plus/Plus Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTG 154964 || || ||||| |||| ||| || ||||| ||| || |||| |||||| || | || Sbjct 32726 ACTCGCTTCATGAACAGATCAGGAGTCCACAGAGCATAGAACAGATCACGGGC---TCTG 32782 Query 154965 TCTTCAGCGC--CCATGTTTCGCTTTAA-ATTCAAAAAATCATATATGTCGGCGTGCCAC 155021 |||| | || || ||| || || ||| || ||| | | ||||||||||| Sbjct 32783 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAAGACATCGGCGTGCCAA 32842 Query 155022 GGCTCTAAATATACGGCCATCGCGCCTTTGCG---TTTTCCTCCTTGATCCACGTGACGC 155078 ||||| | || | ||| | ||||| ||| ||||||||||| || || | | Sbjct 32843 GGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCTTGGTCGACATATCTG 32902 Query 155079 ACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCCA 155138 || || ||| |||| || | || || | | || ||| | |||||||||||| Sbjct 32903 GCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAAGAACCGTTGGTGCCA 32962 Query 155139 CGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCCGTAT 155198 | || | ||| |||||| ||||| |||| || | ||| ||| || Sbjct 32963 CCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGTC 33022 Query 155199 TTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTC 155258 || || || ||||| | || || ||||| || |||| |||||| || || ||| Sbjct 33023 TTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCTTC 33082 Query 155259 AACGTCAACAA-GAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGT 155317 | || |||| ||| || |||| | || ||||| || || || || | || Sbjct 33083 -ATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACCAGCATTGAACAGAGT 33141 Query 155318 AGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTC 155377 |||| ||| || || || ||| | || | | | ||| || || ||||| || Sbjct 33142 AGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTC 33201 Query 155378 AATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGC 155437 || ||| |||||| ||||||| || || ||||||| || ||| || ||||| || Sbjct 33202 GATATCATTACCGTGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTCAGC 33261 Query 155438 AACGCGGCCGTTGATGCGCTTTAAGTA 155464 ||| |||||||| ||| ||||| Sbjct 33262 AACCTTTCCGTTGATTCGCAGCAAGTA 33288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638223425320