Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq100 154 1e-32 seq297 91.5 1e-13 seq578 89.7 5e-13 >seq100 Length=80470 Score = 154 bits (170), Expect = 1e-32 Identities = 341/507 (67%), Gaps = 21/507 (4%) Strand=Plus/Plus Query 52340 CAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGA 52396 ||| ||||| || ||||| |||| |||||| | || | | | || | ||| | Sbjct 36463 CAAGAAGGCCCAATGGGCCATGAGATGGATCTCG---GATAAGGAATCTACTTTCGCCCA 36519 Query 52397 GCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCAT 52456 ||| | |||||||||||| || ||||| | || || ||||| ||||| |||| Sbjct 36520 GCGTCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTCTTCTCCGGATCTTTTGCTTCCAT 36579 Query 52457 CTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATC 52516 ||| | | || | | || | ||||| || || || ||| ||||||| | || || Sbjct 36580 CTTCTGGCTGAAGAAGCGTGGATTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTC 36639 Query 52517 GCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGA 52576 || ||||| || ||||||||||||||||| |||||| | | | | | ||| Sbjct 36640 TCGTGACGAGGGTCTGCACACGGACTTTGCTTGCCTCCTGTTCT---CTCACTTGA---- 36692 Query 52577 AAAATTGGATTCGGACACGA----TCCTGAG--CATGTTCAAGGAGGCGGTGGCTATCGA 52630 | || | | |||| || | |||| ||| || ||||| ||||| || || Sbjct 36693 ATCATCGCCCT--GACAAGAAGGTTGTTGAGGACATCATCGTTGAGGCTGTGGCCATTGA 36750 Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690 | ||||||| || || | ||| || || |||| || || ||||||||| | || || Sbjct 36751 ACAGGAGTTCTTAACAGACGCTCTTCCTGTCGCTCTCCTTGGCATGAACTCTAAGCTGAT 36810 Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTA 52750 |||| ||||||| ||||| || || || || ||| |||| ||||| | ||||| Sbjct 36811 GTGCCAGTACATTGAGTTCGTTGCCGACCGGCTGCTGGTCGCCCTCGGAAACAAGAAGTA 36870 Query 52751 CTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAA 52810 || |||| ||| ||| || || || || ||| | | || ||||| | || |||||||| Sbjct 36871 CTACAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTGGCAGGAAAGACCAA 36930 Query 52811 CTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| || |||||||| || || || || Sbjct 36931 CTTCTTTGAGAAGCGTGTTGGTGACTA 36957 >seq297 Length=30052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| ||| | || | | || ||||| ||||||||||||||| Sbjct 4685 GCCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGA 4744 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || |||||||| || || || | |||| | |||||| ||||| ||||| Sbjct 4745 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 4804 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || || || ||| | || | || |||| || | |||||| | ||||| Sbjct 4805 GATGCCCTCCTTATC-CTGAATCTTCGACTTGACATTG-TCAATAGTGTCGCTGGACTCG 4862 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | || || ||||| ||||| || || || ||||||||| Sbjct 4863 ACCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 4913 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | ||| | | ||||||||||| |||||||| || | Sbjct 4153 CCACCGCGCAGACGGAGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGAC 4212 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || ||||| || |||| | | || |||||||| || || || || Sbjct 4213 AAGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGA 4272 Query 138508 ATACCTTCTTTGTCGGTGATTTTT--TGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || || || ||| | || | || |||| || | |||||| | ||||| | Sbjct 4273 ATGCCCTCCTTATC-CTGAATCTTGCTCTTGACATTG-TCGATGGTGTCTGAAGACTCAA 4330 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || ||||| || || ||||||||||| Sbjct 4331 CCTCTAATGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAAATCTGCAT 4379 >seq578 Length=126255 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 60548 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 60489 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || ||||| ||||| || || ||||| || ||||| ||| || || | | | Sbjct 60488 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 60429 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 60428 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 60369 Query 138605 AA 138606 || Sbjct 60368 AA 60367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255867946160