Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017-
07-31] 1,053 sequences; 31,330,139 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq297 98.7 7e-16
>seq297
Length=30052
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
||||||| || | | | ||| | || || ||||| || || || |||||||| |||
Sbjct 4684 TGCCACCACGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGG 4743
Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
|||| | | | || || | || ||||||||| | ||||||||||| ||||| |
Sbjct 4744 AGAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAG 4803
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || || ||||| || ||| || || ||| | || ||||| ||||| || |
Sbjct 4804 GGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGA 4863
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| |||||||| ||||| || || || ||||| || || || || |||||
Sbjct 4864 CCTCTAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045
|| ||||| |||||||||||| ||| | | | ||||||| | || || |||||| |
Sbjct 3961 TCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTCTTCCAGCTGCTTACCAGCGAAG 4020
Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105
|| | |||||| ||||| ||||| ||||||||||| || ||||| || ||| |
Sbjct 4021 ATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTCACATTG 4080
Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165
|| || || || || || || | |||||||| || || || || || || ||
Sbjct 4081 TCGATTGTGTCAGAGGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACG 4140
Query 15166 AAAATTTGCATA 15177
|| || ||||||
Sbjct 4141 AAGATCTGCATA 4152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357387413432105
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |