Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq297 152 1e-31 seq611 93.3 1e-13 seq578 89.7 1e-12 >seq297 Length=30052 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || ||||||||||||| |||||| |||| ||| || | |||||| Sbjct 4168 AGGACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATCT 4227 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||||||||| || |||||||||||||| || || ||| || || ||| Sbjct 4228 TCAAGTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 4287 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||||| | || || || || ||||| ||| Sbjct 4288 TGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGTC 4347 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || ||||| || Sbjct 4348 TTTCCGGTGAGAGTCTTAACGAAAATCTG 4376 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || ||||||||||| |||||| || | | ||| Sbjct 3931 CGGAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTC 3990 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||||||||| || ||||||||||||||||||||||| || ||| ||| Sbjct 3991 CGCCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCT 4050 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| |||||| |||| ||||| | | || || |||| Sbjct 4051 TCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACCTCCAGT 4110 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || || || || Sbjct 4111 GTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTG 4148 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||| ||||| |||| ||||||||| | |||||| | || ||| Sbjct 4396 AGGACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCT 4455 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || |||||||| || ||||||||||| ||| || || || ||| Sbjct 4456 TCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 4515 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | ||||| | | ||| || || | ||||| ||| Sbjct 4516 TGGATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCACCTCAAGAGTGATGGTC 4575 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || ||||| || || || Sbjct 4576 TTGCCAGTGAGGGTCTTAAC 4595 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || ||||| ||||| || ||||| || | ||||||||| | | ||| Sbjct 4692 CGAAGACGCAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 4751 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| | |||||||||||| ||| || || Sbjct 4752 CGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCC 4811 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || || | ||||| | | || || || || Sbjct 4812 TCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAAG 4871 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 4872 GTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 4909 >seq611 Length=248973 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||||| | || | || || Sbjct 196835 AGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCC 196894 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| |||||||||||||| || Sbjct 196895 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGG 196935 >seq578 Length=126255 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || || | ||||| || |||||||| || ||||||| Sbjct 60548 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 60489 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || || || || ||||| ||||| ||| ||| | Sbjct 60488 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 60429 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || ||||||||||| || || || || | Sbjct 60428 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 60369 Query 199620 AA 199621 || Sbjct 60368 AA 60367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178905694505551