Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq100 152 5e-32 seq297 122 9e-23 seq578 114 1e-20 seq611 104 2e-17 >seq100 Length=80470 Score = 152 bits (168), Expect = 5e-32 Identities = 324/480 (68%), Gaps = 8/480 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 |||||||| || || || ||||| ||| || || ||| || || ||||||||| Sbjct 36942 TTCTCAAAGAAGTTGGTCTTTCCTGCCAGCGAGATACTTTCCATGAAGTCGAAGGGGTTG 36883 Query 132685 GCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||||| ||| || |||| || |||| ||||||| |||||| |||||| Sbjct 36882 GGAGAGTTGTAGTACTTCTTGTTTCCGA---GGGCGACCAGCAGCCGGTCGGCAACGAAC 36826 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800 || ||||| || |||| | || | | || | || || ||| || || || || || Sbjct 36825 TCAATGTACTGGCACATCAGCTTAG-AGTTCATGCCAAGGAGAGCGACAGGAAGAGCGTC 36767 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 || | || || || ||||| || || || || ||| ||| ||| | | Sbjct 36766 TGTTAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATGATGTCCTCAACAACCTTCTT 36707 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 | || || || ||| || ||||| | |||||||||||| |||| ||||| Sbjct 36706 GTCAGGGCGATGATTCAAGTGAGAGAACAGGAGGCAAGCAAAGTCCGTGTGCAGACCCTC 36647 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | || ||||| |||||| |||||| | || ||||| | || || || || || Sbjct 36646 GTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAATCCACGCTTCTTCAG 36587 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| || ||| || || ||||||| ||||| || || ||||| ||||| Sbjct 36586 CCAGAAGATGGAAGCAAAAGATCCGGAGAAGAAGATTCCCTCCACAGCGGCGAAGGCCAC 36527 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 || |||| | |||| || | ||| || | |||||| | || ||||||| |||||| Sbjct 36526 AAGACGCTGGGCGAAAGTAGATTCCTTATCCGAGATCCATCTCATGGCCCATTGGGCCTT 36467 >seq297 Length=30052 Score = 122 bits (134), Expect = 9e-23 Identities = 162/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||| || | || || ||| || | Sbjct 4151 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 4092 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | || | | |||| || |||| ||||| || || |||||| | |||| Sbjct 4091 GACACAATCGACAATG--TGAAGAGCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACC 4034 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| |||| ||| |||||| ||| |||| Sbjct 4033 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGGACCCTCTCCGATTACA 3974 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| ||| || || || |||| |||||| Sbjct 3973 ACATCCAAAAGGAGAGC-ACACTCCACCTGGTTCTGCGT 3936 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || |||||| ||| | Sbjct 4912 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCCAGC 4853 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | || || ||||| || || | ||||| Sbjct 4852 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 4793 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 4792 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 4733 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| | || ||||| |||| |||||| Sbjct 4732 ATTCAGAAGGAATCTACTCTGCACCTGGTTCTGCGT 4697 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || ||||| ||||| |||||||| | || || || ||| ||||| | Sbjct 4597 TCGTTAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCCAGCGACACAATTG 4538 Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | || || |||| ||||| ||||| || || ||||||| ||||| || | Sbjct 4537 ATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGA 4478 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| || || |||||||| |||| ||||| | ||||||||||||||| |||| Sbjct 4477 TCTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGTCCGACTACAACATCCAGAAGG 4418 Query 38434 AAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||| || || | || || ||| || | || || Sbjct 4417 AATCGACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 4381 >seq578 Length=126255 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 60368 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 60427 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 60428 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 60486 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| || Sbjct 60487 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 60546 Query 38432 GG 38433 || Sbjct 60547 GG 60548 >seq611 Length=248973 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| |||||||| ||| ||||||| ||||| || || | ||| ||||| ||||| || Sbjct 196953 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 196894 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || |||||| |||||||||||||| ||||| |||| ||||| | ||||| Sbjct 196893 GACGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 196834 Query 38457 CG 38458 || Sbjct 196833 CG 196832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166216475520