Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq297 147 5e-30 seq578 100 6e-16 seq71 95.1 3e-14 >seq297 Length=30052 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | || ||| ||||| || ||| ||| ||||| || |||||||||| || || | Sbjct 3933 GAGACGCAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTCCG 3992 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||| ||||| ||||||||||| |||||||| || || || |||||||| ||||||||||| Sbjct 3993 CCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTC 4052 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 |||||||| || || ||| || || || || ||||| || || || || || || Sbjct 4053 CTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCAGAGGACTCAACCTCCAGTGT 4112 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || | || || ||||| | ||||| Sbjct 4113 AATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 4151 Score = 125 bits (138), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| ||||| ||||| || || || ||||| ||||| |||| ||||| | ||||| Sbjct 4700 CAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATC 4759 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||||||||| || |||||||| | || || ||||| ||||| ||||| || || || Sbjct 4760 CTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 4819 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACC 195105 ||||| || |||||| || ||||| |||| | | || || || || | ||| | Sbjct 4820 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGAC--TCGACCTCTAAGGTGATG 4877 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || | ||| || ||||| | ||||| Sbjct 4878 GTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912 Score = 116 bits (128), Expect = 8e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || || || || || || ||||| |||| | ||| | || ||||| Sbjct 4399 ACGAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCGTCTTCC 4458 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| ||||| || || || ||||| || Sbjct 4459 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 4518 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||| ||||| |||||| ||||| || | ||||| Sbjct 4519 ATCTTCGACTTGACATTATCAATTGTGTCGCTGGATTCCACCTCAAGAGTGATGGTCTTG 4578 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 4579 CCAGTGAGGGTCTTAACGA 4597 >seq578 Length=126255 Score = 100 bits (110), Expect = 6e-16 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| || ||||||||||| |||||||| Sbjct 60546 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 60487 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || || || || ||||| || || || ||||||||| || Sbjct 60486 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 60427 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 60426 ATGGTGTCGCTCGA---CTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 60370 Query 195130 AA 195131 || Sbjct 60369 AA 60368 >seq71 Length=90593 Score = 95.1 bits (104), Expect = 3e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 160574 AGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAA 160633 |||||| | || | ||||| || | |||||| | ||||| ||||||||| |||| | Sbjct 32781 AGAGCCCGTGATCTGTTCTATGCTCTGTGGACTCCTGATCTGTTCATGAAGCGAGTTGAG 32722 Query 160634 GACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTAT 160693 ||| || || |||| || ||||| ||||||||||| || || || | ||||| ||| Sbjct 32721 TCCAACGGTGACTGGACTCTGTTCTGCCCCAATGAAGCCCCCGGCCTGGCAGATGTCTAT 32662 Query 160694 GGTTCCGAGTTCGAGACTCTTTATGAA 160720 || |||||| || ||||||||||| Sbjct 32661 GGCGACGAGTTTGATGCTCTTTATGAA 32635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109466631359651