Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq297 104 2e-17 >seq297 Length=30052 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| ||| | |||||| || || || ||||| || || || ||| | || | || Sbjct 3939 CAGAACCAGGTGGAGTGTGCTCTCCTTTTGGATGTTGTAATCGGAGAGGGTCCGCCCGTC 3998 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || ||||||||| | || | || |||||||| Sbjct 3999 TTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 4058 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATT----CACCGGCCTCAACATCGACGGTTA 34944 ||||| || || || | |||||| || || |||||| || | || | Sbjct 4059 TTGGATCTTGCTCTTCAC--AT--TGTCGATTGTGTCAGAGGACTCAACCTCCAGTGTAA 4114 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| ||||| ||||| || |||||||||||| Sbjct 4115 TGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCATA 4152 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| ||| | || ||| ||||||||||| ||||| || || | || |||| Sbjct 4700 CAGAACCAGGTGCAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATC 4759 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || || || || || | || |||||||| | || | |||||||| || Sbjct 4760 CTCGAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 4819 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||||| ||||| | || | || | || ||| || || | ||| ||||| Sbjct 4820 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCTAAGGTGATGGT 4879 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| || ||||||||||| Sbjct 4880 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 4912 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/213 (70%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| |||| || || || ||||| || || || | | | || |||| || | Sbjct 4172 CAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAATCAGACAAGGTACGGCCATCTTCAA 4231 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | || ||||||||||| || || || ||||| ||| | || | |||||||| || || Sbjct 4232 GTTGCTTTCCGGCAAAAATGAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAA 4291 Query 34894 TCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||| ||||| || | ||||| || | |||||| || | || || || Sbjct 4292 TCTTGCTCTTGAC--AT--TGTCGATGGTGTCTGAAGACTCAACCTCTAATGTGATAGTC 4347 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| ||||||||||| || || ||||||||| Sbjct 4348 TTTCCGGTGAGAGTCTTAACGAAAATCTGCATA 4380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629433834984