Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq100 143 5e-29 seq71 131 3e-25 >seq100 Length=80470 Score = 143 bits (158), Expect = 5e-29 Identities = 330/500 (66%), Gaps = 7/500 (1%) Strand=Plus/Plus Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| | |||||||||| |||||| || |||| || | | |||| || Sbjct 36466 GAAGGCCCAATGGGCCATGAGATGGATCTCGGATAAGGAATCTACTTTCGCCCAGCGTCT 36525 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || ||||| || ||||||||||| ||||| ||| ||| || ||||| |||||||||| Sbjct 36526 TGTGGCCTTCGCCGCTGTGGAGGGAATCTTCTTCTCCGGATCTTTTGCTTCCATCTTCTG 36585 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGG 26002 ||| ||| || || ||||| || || ||||| ||||||||||||||| | | Sbjct 36586 GCTGAAGAAGCGTGGATTGATGCCTGGTCT-CACTTTCTCCAACGAGCTCATCTCTCGTG 36644 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAAC 26062 |||||||||| |||| || ||||| ||||| || | | | |||||| || | Sbjct 36645 ACGAGGGTCTGCACACGGACTTTGCTTGCCTCCTGTTCTC---TCACTTGAATCA-TCGC 36700 Query 26063 CTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | | |||| || || | |||||| |||||||||| || || ||||||| Sbjct 36701 CCTGACAAGAAGGTTGTTGAGGACATCATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 36760 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | ||||||||| | || ||| |||| ||| Sbjct 36761 TTAACAGACGCTCTTCCTGTCGCTCTCCTTGGCATGAACTCTAAGCTGATGTGCCAGTAC 36820 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 ||||||| || ||||||| |||||| | || ||| | | ||||| | Sbjct 36821 ATTGAGTTCGTTGCCGACCGGCTGCTGGTCGCCCTCGGAAACAAGAAGTACTACAACTCT 36880 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 || ||||| |||||||| ||||||| || ||| ||| ||| ||||||||||||||||| Sbjct 36881 CCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTGGCAGGAAAGACCAACTTCTTTGAG 36940 Query 26302 AAGAGGGTCGGCGACTATCA 26321 ||| | || || ||||| || Sbjct 36941 AAGCGTGTTGGTGACTACCA 36960 Score = 84.2 bits (92), Expect = 4e-11 Identities = 162/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||| ||||| || || || |||||||||||| ||||||||||| Sbjct 36065 ATTTGGCAAATGTATAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 36124 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT--TTC-TCAAG 25593 |||| || || ||| |||| || | || || || ||| || ||| || Sbjct 36125 TCCAAAGATTTGCACGACTGGAACAACCGCCTGAATGATGATGAGCGTTACTTCATCTCC 36184 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || |||||||| || || || || ||||| ||| ||| | Sbjct 36185 CACGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTCAATGAGAACCTGCTGGAGCGC 36244 Query 25654 TTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| || || ||||| || | | ||||| ||| |||||||| |||||||| Sbjct 36245 TTCAGCAATGAGGTGCAGGTGCCT-GAGGCTCGGTGCTTCTACGGCTTCCAGAT 36297 >seq71 Length=90593 Score = 131 bits (144), Expect = 3e-25 Identities = 337/505 (67%), Gaps = 14/505 (3%) Strand=Plus/Plus Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| || | |||| |||||| |||| | || | || |||||| || || || | Sbjct 32692 GGGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGT 32751 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC--TCCTCCACGCCGTTGTTTTTCCTC 222115 |||||| || | || ||||| | || | ||| |||||| |||| ||| || | Sbjct 32752 CCACAGAGCATAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGA 32809 Query 222116 AGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCG 222175 |||||||| || ||||| | || |||||||| |||||||| || | ||| | |||||| Sbjct 32810 AGATCCAAGAATTCAAAGACATCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCA 32869 Query 222176 GGTCGCTTGTTGCCACCCTGATCCACCATCCTCTC-CAGAGC-GTTGAAGATGCGAAGGG 222233 || ||||| || || || || || || || ||| ||| | |||||| | ||||| Sbjct 32870 GGGCGCTTATTTCCTCCTTGGTCGAC-ATA-TCTGGCAGTGTTGTTGAACACACGAAGCA 32927 Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC--- 222290 | || || | || ||||| |||||||||||| |||||| | || || | Sbjct 32928 TGGGAACAATACCATTGGAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGA 32987 Query 222291 TCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCT 222350 | ||| | | | | ||||||||||||||| ||||||||||| || || ||| Sbjct 32988 TGCGGTGAACGTTA---AGACCGATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCT 33044 Query 222351 TGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACG 222410 | || ||||| ||| || || || |||||||| | | | || || ||||| | Sbjct 33045 TCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAG 33104 Query 222411 ACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC 222470 || ||| | || || | || || || ||||| || ||| || || || ||||| Sbjct 33105 CCAGCTGCGGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATT 33164 Query 222471 CCCTAGACATCAGATCGTACGTCTC 222495 | ||||| |||| ||| ||||| Sbjct 33165 TCTGGGACATGAGATGGTAGGTCTC 33189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928832574080320