Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 140 4e-27 seq423 118 1e-20 seq100 116 5e-20 seq90 105 8e-17 seq71 89.7 6e-12 >seq3 Length=96455 Score = 140 bits (154), Expect = 4e-27 Identities = 127/158 (80%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||||||||| || |||||| |||||||| || | ||||| |||||| Sbjct 96264 GACAGCATCGGCGGCACGGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 96205 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||| | ||||||||||| ||||| |||||| Sbjct 96204 CCCTGCTTCGACAAGCTCGAGGCCAAGCTGGGGCACGCCATGCTCAGCATCCCCGCCACC 96145 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTGCG 19202 ||||| |||||||| ||| |||| || |||| |||| Sbjct 96144 AAGGGCTTCGAGATCGGC-TCGGGCTTCGGCGGCTGCG 96108 >seq423 Length=139417 Score = 118 bits (130), Expect = 1e-20 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||||||||| ||||| |||| | ||| |||| |||||| |||| || ||| Sbjct 39985 GCAGCCAACTACCTCGATATCAAAGCTCTCTTGGATGTTGGCTGCAAGACTGTTGCGAAC 39926 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| |||||||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct 39925 ATGATTAAGGGCAAATCTCCCGAGGAGATTCGCAAGACCTTCAACATTCAGAACG 39871 >seq100 Length=80470 Score = 116 bits (128), Expect = 5e-20 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||||||||| || | |||||||| Sbjct 36966 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCCAGCGAGATA 36907 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| |||||||| | ||||||| ||| | | |||||| | | Sbjct 36906 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACC 36847 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| || ||||| |||||||||||||| || | ||||||||| | | Sbjct 36846 AGCAGCCGGTCGGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCAAGG 36787 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || | | ||||| | || || | || ||||| |||||| Sbjct 36786 AGAGCGACAGGAAGAGCGTCTGTTAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATG 36727 Query 868931 AT 868932 || Sbjct 36726 AT 36725 Score = 98.7 bits (108), Expect = 1e-14 Identities = 175/253 (69%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||| ||||||||||| || ||||||||||||||| ||| || |||| | ||| | Sbjct 36320 CCGAATGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCGAGCCTCAGGCACCT 36261 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| || | ||||||||| ||||| ||||| ||| |||| Sbjct 36260 GCACCTCATTGCTGAAGCGCTCCAGCAGGTTCTCATTGACGATTCCGTCAGAGGCAGCGA 36201 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGT 869807 | || || |||||||| ||| |||| ||||| || || | | ||| ||||| Sbjct 36200 AGAAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCATTCAGGCGGTTGTTCCAGT 36141 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || | ||| || | ||||||||||||||||| || || ||||| || | Sbjct 36140 CGTGCAAATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCT 36081 Query 869868 TGTACATCTCCCA 869880 | ||||| | ||| Sbjct 36080 TATACATTTGCCA 36068 >seq90 Length=199335 Score = 105 bits (116), Expect = 8e-17 Identities = 247/362 (68%), Gaps = 17/362 (5%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCC 1726743 ||||| || | ||| |||| | |||||||| || || |||| | | | ||||| ||||| Sbjct 101863 TGCGGGTGCGAGGCCGCGCCGATGGCGTCGA-TGGCGACGCCCAGGTTTCCGTCCGTGCC 101921 Query 1726744 GTTCTTGAAGCCGAT-GGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCT 1726802 ||||||| |||| || || ||| | || | ||||| | ||||||||| | |||| || Sbjct 101922 GTTCTTGTAGCCAATGGGGAAGCTG-AGCCCGGACGCGAGCTCGCGGTGGAGCTGGGACT 101980 Query 1726803 CGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCA 1726859 |||| ||||||||||| | |||||| | || ||||| |||| | | |||| Sbjct 101981 CGGTGGTGCGCGCGCCGATGGCGCCGAGGGAGACAAGGTCGGCCAGGTACTGCGGGG--- 102037 Query 1726860 CCAGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCG 1726917 ||| || | ||| | |||| ||| | |||| || | | | | ||| ||| Sbjct 102038 --AGATGGTGTCGAGCATCTCGCTGGCGATGGGC--AT-GCCCATGCTGGTGAGGTCGGC 102092 Query 1726918 CAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGG 1726977 | || ||| ||| | |||||| | | | | | ||||| || || |||||| Sbjct 102093 GTAGAGTTTGCGGGACACGCGCAGGCCCTTGTTGATGTTGAACGACTGGTTGATGTCGGG 102152 Query 1726978 GTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCAT 1727037 |||| || || |||||||| |||| ||| ||||| ||||| || | || |||||||| Sbjct 102153 GTCGTTGATGAGACCCTTCCATCCGATGGTTGTGCGGGGCTTCTCCAGGTATGCGCGCAT 102212 Query 1727038 GA 1727039 || Sbjct 102213 GA 102214 >seq71 Length=90593 Score = 89.7 bits (98), Expect = 6e-12 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 |||||||| || | || |||| ||| || || || |||||||| || | || ||||| Sbjct 32888 TGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAA 32947 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||||||||| | | ||||| ||| | || || | ||| || || ||| Sbjct 32948 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCG 33007 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || ||||| | ||| ||||| | || || || || ||||||||||| || ||| Sbjct 33008 ATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCG 33067 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || ||||||| || || || ||||| || | ||||| || | || || Sbjct 33068 ATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACCA 33127 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 || ||||| || || || Sbjct 33128 GCATTGAACAGAGTAGG 33144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107052785888801