Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq297 116 3e-21 seq71 113 4e-20 >seq297 Length=30052 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| || || || || || | Sbjct 4151 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 4092 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 4091 GACACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 4032 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || |||||||| || | | | | | || ||||| ||| Sbjct 4031 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGGCGGACCCTCTCCGATTACAAC 3972 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| ||| |||| |||| | ||||| || Sbjct 3971 ATCCAAAAGGAGAGCACACTCCACCTGGTTCTGCGTCTCCGCGGTGG 3925 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || || || || || || || || || || || ||| ||| ||||||| | || | Sbjct 4594 TTAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCCAGCGACACAATTGATA 4535 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||| ||||| || || || |||||||| || || || |||||| Sbjct 4534 ATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGATCT 4475 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 | || || || |||||||| || | | |||| || || ||||| || ||||||| Sbjct 4474 TCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGTCCGACTACAACATCCAGAAGGAAT 4415 Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||| | || | || |||| || || Sbjct 4414 CGACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 4381 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || || ||| | Sbjct 4912 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTAGAGGTCGAGTCCAGC 4853 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || ||||| || || Sbjct 4852 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 4793 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||||| |||||| | | | || || || ||| Sbjct 4792 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 4733 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || ||| |||| |||| | || || ||| Sbjct 4732 ATTCAGAAGGAATCTACTCTGCACCTGGTTCTGCGTCTTCGTGGTGGC 4685 >seq71 Length=90593 Score = 113 bits (124), Expect = 4e-20 Identities = 408/629 (65%), Gaps = 21/629 (3%) Strand=Plus/Plus Query 139390 CCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCG 139449 ||||| | || || ||| ||||||||||||| ||| |||||| ||| | | || ||| Sbjct 32714 CCGTTGGACTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGCATAGAACAGATCA 32773 Query 139450 CGCGCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTA-AGGAAATCAAAAACG 139506 || || ||| | || ||| ||| ||| | | | | | | ||| ||||| || Sbjct 32774 CGGGC--TCTGACTTCCTCCTTACCGTGGTT-CTTGCGAAGATCCAAGAATTCAAAGACA 32830 Query 139507 TCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGA 139563 || |||||||| || ||||| || ||||| | ||||| || || || ||||| Sbjct 32831 TCGGCGTGCCAAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCTTGG 32890 Query 139564 TCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT 139623 ||||| | || ||| || ||||| || || | ||| || | | ||| | | | Sbjct 32891 TCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAAGAA 32950 Query 139624 CCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCTCGGACGTCATGTACATTGATGCC 139679 |||||||||| || ||| ||| |||| ||| |||| | || || || | || Sbjct 32951 CCGTTGGTGCCACCAATGTAGGAGCCTGT----AGCACGGATGCGGTGAACGTTAAGACC 33006 Query 139680 GATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCT 139739 ||| || ||| | || || || | | | ||| | ||| ||||| |||||| Sbjct 33007 GATACCACCGGCGGTCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTC 33066 Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799 ||||| || |||| ||| ||| || ||||| || | || |||||| | || || Sbjct 33067 GATGCTATCCTCCTTCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACC 33126 Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859 || |||||||||||| || || ||||| || | ||||| | | ||| || Sbjct 33127 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 33186 Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 || ||||| | | ||||| | ||||| |||||||| | || ||||||| || || Sbjct 33187 CTCAATGGCCTTTTCGATATCATTACCGTGAATACCGACGGCAACACGCATCAACAAGTG 33246 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTC 139977 ||| || || || ||| || | |||| || || |||| ||| || ||| Sbjct 33247 CTGGGGACGCTCAGCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCG--CTCGAGTGTC 33304 Query 139978 TTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||| |||| || | | |||||||| || Sbjct 33305 TTGAAGCCGAAAAAGTTGTAGTTGAAGTC 33333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891678222840