Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq71 114 2e-19 seq100 96.9 5e-14 seq90 96.9 5e-14 >seq71 Length=90593 Score = 114 bits (126), Expect = 2e-19 Identities = 207/300 (69%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGC 259941 |||||| | |||||| ||| | | ||||| ||| || | || || || || ||||| Sbjct 33186 ACCTACCATCTCATGTCCCAGAAATACTTCAC-TCATGCTTCTCCTACTCTGTTCAATGC 33128 Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001 || || || | |||||| | || ||||| || | || ||||||| ||| || Sbjct 33127 TGGTACTCCCCAACCGCAGCTGGCTTCTTGCTTCCTTGTCGATATGAAGGAGGATAGCAT 33068 Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061 ||| || ||||| ||||| || ||| || || | ||||| ||| | ||||| || || Sbjct 33067 CGAAGGTATCTACGACACACTGAAGACTTGTGCTATGATCTCGAAGACCGCCGGTGGTAT 33008 Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121 |||| || || ||| | || || | ||| ||||| | | ||||||||||| Sbjct 33007 CGGTCTTAACGTTCACCGCATCCGTGCTACAGGCTCCTACATTGGTGGCACCAACGGTTC 32948 Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 ||||| || |||| ||||||||||| || || ||| |||| || | || |||||||| Sbjct 32947 TTCCAATGGTATTGTTCCCATGCTTCGTGTGTTCAACAACACTGCCAGATATGTCGACCA 32888 >seq100 Length=80470 Score = 96.9 bits (106), Expect = 5e-14 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| ||||| || | || || | ||||| | | || | || || || || Sbjct 36725 ATCATCGTTGAGGCTGTGGCCATTGAACAGGAGTTCTTAACAGACGCTCTTCCTGTCGCT 36784 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| | ||||||||| | | ||| ||||||||||||||||| || || |||||||| | Sbjct 36785 CTCCTTGGCATGAACTCTAA-GCTGATGTGCCAGTACATTGAGTTC-GTTGCCGACCGGC 36842 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | || ||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 36843 TGCTGGTCGCCCTCGGAAACA-AGAAGTACTACAACTCTCCCAACCCCTTCGACTTCATG 36901 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 || |||||||| | || ||||||||||| || ||| || | ||| || ||| Sbjct 36902 GAAAGTATCTCGCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTACCAG 36961 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 |||||||| || | |||| Sbjct 36962 AAGGCCGGTGTTATGGCCA 36980 >seq90 Length=199335 Score = 96.9 bits (106), Expect = 5e-14 Identities = 124/166 (75%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 165748 TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACC 165807 |||| ||||| ||| | |||||| |||| ||||||||||||||| |||| | |||| Sbjct 102025 TGGCCGACCTTGTCTCCCTCGGCGCCATCGGCGCGCGCACCACCGAGTCCCAGCTCCACC 101966 Query 165808 GCGAGATGGCGTCGGCGCTGCCGC-TGCCCATTGGCTTCAAAAACAGCACCGACGGCAGC 165866 ||||| | ||||| | ||| | || | |||||||||| ||| ||| |||| ||||| | | Sbjct 101965 GCGAGCTCGCGTCCGGGCT-CAGCTTCCCCATTGGCTACAAGAACGGCACGGACGGAAAC 101907 Query 165867 GT-GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACAC 165911 | |||| | ||| |||| ||| | || | ||| | || || ||| Sbjct 101906 CTGGGCGTC-GCCATCGACGCCATCGGCGCGGCCTCGCACCCGCAC 101862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177709636214586