Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20thermomutatus_20[genbank_20GCA_5F002237265.1_202017- 07-31] 1,053 sequences; 31,330,139 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq71 188 1e-42 seq100 111 2e-19 >seq71 Length=90593 Score = 188 bits (208), Expect = 1e-42 Identities = 542/823 (66%), Gaps = 8/823 (1%) Strand=Plus/Plus Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTC 69649 || |||||| ||||| || ||||| ||| |||| ||||| ||| || ||||| | || || Sbjct 32722 CTCAACTCGCTTCATGAACAGATCAGGAGTCCACAGAGC-ATAGAACAGATCACGGGCTC 32780 Query 69650 TATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCC 69709 | ||| || || || || || |||||| | || || | | ||| | |||| Sbjct 32781 TGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAATTCAAAGACATCGGCGTGCC 32840 Query 69710 ATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATC 69769 | || || || || || || | | || || || ||||||||||| || || | |||| Sbjct 32841 AAGGCTCCAGGTAAATGGCAAAAGCGCCAGGGCGCTTATTTCCTCCTTGGTCGACATATC 32900 Query 69770 TGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTC 69829 |||||||||| || | || | ||||| |||| ||||||||| || ||| || || | Sbjct 32901 TGGCAGTGTTGTTGAACACACGAAGCATGGGAACAATACCATTGGAAGAACCGTTGGTGC 32960 Query 69830 CAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCA 69889 || ||| || ||| | || || || || ||||| || || || || Sbjct 32961 CACCAATGTAGGAGCCTGTAGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGG 33020 Query 69890 TTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTA 69949 | || ||||| | ||||||| |||| |||||| || ||||| || |||||||| || Sbjct 33021 TCTTCGAGATCATAGCACAAGTCTTCAGTGTGTCGTAGATACCTTCGATGCTATCCTCCT 33080 Query 69950 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATG 70009 |||| | | ||| || || || || || | || ||| || ||||| || | | Sbjct 33081 TCATATCGACAAGGAAGCAAGAAGCCAGCTGCGGTTGGGGAGTACCAGCATTGAACAGAG 33140 Query 70010 TAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATT 70069 ||||||| || |||||||| |||| | || | |||| ||| || ||||| || || Sbjct 33141 TAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTT 33200 Query 70070 CTATATCCC-ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCT 70128 | ||||| || | ||||| || | || ||||||||||||| ||||| || || || Sbjct 33201 CGATATCATTACCG-TGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTCA 33259 Query 70129 ACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAG 70188 | || || ||| || || ||| || || || || || || || ||| || Sbjct 33260 GCAACCTTTCCGTTGATTCGCAGCAAGTAGGACCGCTCGAGTGTCTTGAAGCCGAAAAAG 33319 Query 70189 TTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTA 70248 ||||| ||||| | ||||| | |||| |||| || || | ||| || ||| | Sbjct 33320 TTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCAGCATGTTTCATG 33379 Query 70249 ACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAAC 70307 || || | |||| | | ||||| || || | |||| || || || || || Sbjct 33380 ACAAT-TTCATATGTCTCTTTCGAGATCATTGGTGCCGGTTTCTTGTTCTTGGGGTTGAC 33438 Query 70308 ATAGTTGAATAAATCTTCCATTA-CATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 ||||| | | | || || | || | || | | || || |||| |||||| | | Sbjct 33439 ATAGTGGTAGAGGTCCGAGATGACCAGCGAGAACT-GCTTCTTGGTTTGCTTGTGGAGGT 33497 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | || | |||||| | ||| || || || ||||| ||||| || Sbjct 33498 TGGAAACGGCTATACGGGCAGCGAGGATGGCATAATCAGGGTG 33540 >seq100 Length=80470 Score = 111 bits (122), Expect = 2e-19 Identities = 299/457 (65%), Gaps = 8/457 (2%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 |||||| || || ||||| |||||||| || ||||| || || || || || ||| | Sbjct 36976 CATAACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 36917 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 || || ||| |||||||||| || || || || | | || || | || || ||| Sbjct 36916 CAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGTAGTACTTCTTGTTTCC 36857 Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492 | | | || | || ||||| || || ||||| ||||| | | | || Sbjct 36856 GAGGGCGACCAGCAGCCGGTCGGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTT 36797 Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGC 39552 ||| || | ||| || || ||||| || |||| ||||| | ||| ||| | || || Sbjct 36796 CATGCCAAGGAGAGCGACAGGAAGAGCGTCTGTTAAGAACTCCTGTTCAATGGCCACAGC 36737 Query 39553 CTCTGTTATTATCGATGTT----ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAA 39608 ||| || ||||| || |||| | || |||| || || | Sbjct 36736 CTCAACGAT----GATGTCCTCAACAACCTTCTTGTCAGGGCGATGATTCAAGTGAGAGA 36681 Query 39609 ACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAA 39668 ||| | ||| || ||||| || || ||||| || | | || | ||||| || | Sbjct 36680 ACAGGAGGCAAGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 36621 Query 39669 ATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAG 39728 | ||||| |||||||| | |||||||| || ||||| || |||| |||||||||||| | Sbjct 36620 AAGTGAGACCAGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCGG 36561 Query 39729 AAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 | |||||||| || || || || || || || ||||| Sbjct 36560 AGAAGAAGATTCCCTCCACAGCGGCGAAGGCCACAAG 36524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899758562920